Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_00185 and IAI47_00190 are separated by 28 nucleotidesIAI47_00190 and IAI47_00195 are separated by 344 nucleotidesIAI47_00195 and IAI47_00200 are separated by 17 nucleotidesIAI47_00200 and IAI47_00205 are separated by 539 nucleotides IAI47_00185: IAI47_00185 - xylose ABC transporter ATP-binding protein, at 38,153 to 39,673 _00185 IAI47_00190: IAI47_00190 - D-xylose ABC transporter substrate-binding protein, at 39,702 to 40,694 _00190 IAI47_00195: IAI47_00195 - xylose isomerase, at 41,039 to 42,361 _00195 IAI47_00200: IAI47_00200 - xylulokinase, at 42,379 to 43,821 _00200 IAI47_00205: IAI47_00205 - hypothetical protein, at 44,361 to 44,846 _00205
Group Condition IAI47_00185 IAI47_00190 IAI47_00195 IAI47_00200 IAI47_00205
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.4 -0.1 +0.0 -0.2
carbon source Ying_sugar7 rep B; time point 2 -0.0 -0.3 -0.3 -0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.3 +0.0 +0.0 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.1 -0.2 +0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.1 +0.1 +0.0 -0.5
carbon source Ying_sugar7 rep A; time point 3 +0.2 -0.1 -0.3 -0.2 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.2 +0.0 -0.4 -0.1
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.2 +0.1 +0.2 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.5 -0.0 +0.3 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.1 +0.2 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.1 -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.1 +0.2 +0.2 -0.6
carbon source Ying_sugar7 rep C; time point 2 -0.1 +0.4 -0.1 -0.3 -0.2
carbon source Ying_all64 rep A; time point 3 +0.2 +0.1 -0.1 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.2 +0.4 +0.2 -0.5
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.4 +0.1 +0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.4 +0.3 +0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.3 +0.2 +0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.1 +0.2 +0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 +0.2 +0.2 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 +0.5 +0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.3 +0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 +0.3 +0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.3 +0.3 -0.3
stress copper (II) chloride 2 uM, anaerobic +0.2 +0.3 +0.1 +0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.1 +0.7 +0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.5 +0.3 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.4 +0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.0 +0.5 +0.3 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.0 +0.5 +0.2 -0.3
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IAI47_00185
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IAI47_00190
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IAI47_00200
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IAI47_00205
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