Fitness for 5 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS21940	HSERO_RS21945	HSERO_RS21950	HSERO_RS21955	HSERO_RS21960
carbon source	D-Xylose (C)	-0.1	-0.9	-1.2	-0.9	-1.0
carbon source	D-Sorbitol (C)	+0.0	-0.9	-1.3	-1.1	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.2	-1.0	-1.5	-0.2	+0.0
micoeukaryotes	Acanthamoeba sp., muxed culture-1	-0.7	-0.9	-0.5	-0.4	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.5	-0.6	-1.0	-0.5	-0.0
carbon source	D-Galactose (C)	-0.1	-0.6	-0.7	-0.4	-0.7
stress	Sisomicin 0.125 mg/ml	+0.4	+0.0	-1.3	-1.0	-0.5
carbon source	D-Glucose (C)	+0.7	-0.4	-1.3	-1.2	-0.3
vitamin	With vitamins t2	-0.7	-0.9	-0.8	-0.1	+0.3
carbon source	L-Rhamnose (C)	-0.4	-0.8	-1.0	-0.5	+0.5
carbon source	m-Inositol (C)	-0.1	-1.0	-0.3	-1.0	+0.3
carbon source	L-Asparagine (C)	-0.7	-0.4	-0.4	-0.8	+0.2
carbon source	L-Malic (C)	-0.1	-0.4	-1.0	-0.9	+0.4
carbon source	L-Malic (C)	+0.2	+0.2	-0.8	-1.0	-0.6
carbon source	D-Glucose-6-Phosphate (C)	+0.0	-0.9	-0.8	-0.6	+0.3
carbon source	D-Gluconic Acid (C)	+0.4	-0.5	-0.9	-1.0	-0.0
carbon source	Xylitol (C)	+0.7	-0.4	-1.1	-0.6	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	+1.2	-0.4	-2.2	+0.1
carbon source	succinate (C)	+0.3	-1.3	-0.0	-0.9	+0.2
carbon source	succinate (C)	+0.1	-0.5	-0.7	-1.0	+0.4
carbon source	D,L-Lactate (C)	-0.4	+0.5	-0.8	-0.8	+0.1
carbon source	L-Fucose (C)	+0.5	-0.8	-1.0	-0.3	+0.2
stress	A22 0.04 mg/ml	+0.4	+0.4	-0.5	-0.5	-0.8
carbon source	D-Mannose (C)	-0.3	+0.3	-0.5	-0.9	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7	-0.5	+0.5	-0.3	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.3	-2.1	+0.9	-0.5	+0.4
control	NoPredeControl	+0.7	-0.9	-0.5	+0.8	+0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+2.2	-0.4	-1.1	+0.3	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5	+0.6	+0.1	+0.4	+1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+5.1	-0.4	-0.2	-0.2	+0.2