Fitness for 5 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS18345	HSERO_RS18350	HSERO_RS18355	HSERO_RS18360	HSERO_RS18365
stress	Cisplatin 0.003 mg/ml	+0.1	-0.1	-5.5	-7.3	-0.9
stress	Sisomicin 0.125 mg/ml	+0.3	-0.2	-1.4	-3.2	-3.8
stress	Lomefloxacin 0.012 mM	-0.1	-0.5	-1.3	-4.0	-2.3
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 3 days	-0.7	-0.8	-1.1	-2.7	+0.2
stress	Nickel (II) chloride 0.6 mM	-0.1	-0.4	-0.6	-0.9	-2.5
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.4	-0.0	-2.0	-1.2	-1.5
carbon source	L-Malic (C)	+0.0	-0.2	-0.9	-1.8	-1.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	+0.1	-1.6	-1.1	-0.9
stress	A22 0.04 mg/ml	-0.1	-0.4	-0.7	-0.9	-1.7
stress	nitrate 200 mM	+0.2	-0.4	-0.4	-0.9	-2.4
carbon source	D-Gluconic Acid (C)	-0.2	+0.2	-0.4	-1.3	-2.0
carbon source	Glycerol (C)	-0.0	-0.4	-1.0	-1.8	-0.4
stress	sodium fluoride 100 mM	+0.1	-0.4	-0.8	-1.1	-1.3
agar plate interaction control	Taped volatile agar plate with no fungus	+0.1	+0.2	-1.1	-1.2	-1.5
carbon source	D-Glucose-6-Phosphate (C)	-0.2	+0.2	-0.8	-0.8	-1.8
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.5	+0.0	-1.5	-1.0	-1.4
carbon source	L-Arabinose (C)	-0.3	+0.1	-1.4	-0.4	-1.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.3	-1.3	-0.8	-1.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-0.3	+0.2	-1.4	-1.7	-0.2
carbon source	Xylitol (C)	+0.3	+0.0	-1.7	-1.3	-0.5
carbon source	Carbon source 2-Deoxy-D-Ribose 5 mM	-0.3	+0.5	-0.2	-2.3	-0.3
control	NoPredeControl	+0.2	+0.6	+0.3	+0.7	-4.0
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 3 days	-0.1	-0.1	-1.1	-1.0	+1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.8	+0.1	-0.4	-0.3	-1.4
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 8 days	+0.0	-0.1	-0.5	-0.6	+3.3
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 3 days	-0.2	-0.1	-0.4	+0.1	+2.8
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 3 days	+0.2	+0.2	-0.2	-0.4	+3.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5	+0.0	-0.1	-0.4	+3.2
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 8 days	-0.1	+0.1	-0.0	-0.4	+3.6
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 8 days	-0.2	-0.1	-0.6	-0.8	+7.0