Fitness for 5 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

Or view all 244 experiments or choose conditions or try the comparative fitness browser

Group	Condition	HSERO_RS17375	HSERO_RS17380	HSERO_RS17385	HSERO_RS17390	HSERO_RS17395
r2a control	R2A control	-0.3	-0.5	N.D.	-0.5	-0.5
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.8	+0.1	N.D.	-0.5	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.7	-0.2	N.D.	-0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.4	-0.2	N.D.	-0.3	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.5	-0.2	N.D.	-0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.7	-0.2	N.D.	-0.1	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.4	-0.2	N.D.	-0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.0	-0.3	N.D.	-0.4	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.4	-0.2	N.D.	-0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	-0.2	N.D.	-0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.3	-0.2	N.D.	-0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	-0.2	N.D.	-0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6	-0.1	N.D.	-0.3	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.5	-0.2	N.D.	-0.2	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.4	-0.2	N.D.	-0.2	-0.3
r2a control	R2A control	-0.5	-0.2	N.D.	-0.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5	+0.3	N.D.	-0.4	-0.4
supernatant control	Vogels_fungal_media 0.1X	-0.6	-0.0	N.D.	-0.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6	-0.1	N.D.	-0.2	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	-0.1	N.D.	-0.2	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-0.8	+0.1	N.D.	-0.1	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	+0.4	N.D.	-0.3	-0.3
agar plate interaction control	Taped volatile agar plate with no fungus	-0.5	+0.3	N.D.	-0.3	-0.3
agar plate interaction control	Taped volatile agar plate with no fungus	-0.5	+0.3	N.D.	-0.3	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-0.9	+0.3	N.D.	-0.1	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7	+0.5	N.D.	-0.2	-0.3
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.7	+0.3	N.D.	-0.1	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	+0.4	N.D.	-0.2	-0.2
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.4	+0.5	N.D.	-0.1	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	+0.4	N.D.	-0.2	-0.2