Fitness for 5 genes in Herbaspirillum seropedicae SmR1

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500 ntHSERO_RS17260 and HSERO_RS17265 are separated by 126 nucleotidesHSERO_RS17265 and HSERO_RS17270 overlap by 28 nucleotidesHSERO_RS17270 and HSERO_RS17275 are separated by 326 nucleotidesHSERO_RS17275 and HSERO_RS17280 are separated by 213 nucleotides HSERO_RS17260: HSERO_RS17260 - membrane protein, at 3,952,954 to 3,954,141 _RS17260 HSERO_RS17265: HSERO_RS17265 - glucosyltransferase MdoH, at 3,954,268 to 3,956,916 _RS17265 HSERO_RS17270: HSERO_RS17270 - glucan biosynthesis protein D, at 3,956,889 to 3,958,514 _RS17270 HSERO_RS17275: HSERO_RS17275 - diacylglycerol kinase, at 3,958,841 to 3,959,335 _RS17275 HSERO_RS17280: HSERO_RS17280 - lysine decarboxylase, at 3,959,549 to 3,961,801 _RS17280
Group Condition HSERO_RS17260 HSERO_RS17265 HSERO_RS17270 HSERO_RS17275 HSERO_RS17280
stress Sisomicin 0.125 mg/ml -0.5 -1.2 -1.9 N.D. N.D.
stress A22 0.04 mg/ml -1.8 -0.7 -0.8 N.D. N.D.
stress Nickel (II) chloride 0.6 mM -0.1 -0.7 -1.0 N.D. N.D.
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 -1.0 -1.0 N.D. N.D.
carbon source Glycerol (C) -0.9 -0.3 -0.2 N.D. N.D.
carbon source D,L-Lactate (C) -1.2 +0.3 -0.1 N.D. N.D.
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 -0.6 -0.7 N.D. N.D.
carbon source L-Rhamnose (C) -1.0 +0.2 +0.0 N.D. N.D.
carbon source L-Lactate (C) -1.1 +0.3 +0.2 N.D. N.D.
control NoPredeControl +0.4 -0.3 -0.8 N.D. N.D.
carbon source D,L-Lactate (C) -0.8 +0.3 +0.1 N.D. N.D.
carbon source D-Gluconic Acid (C) -1.0 +0.7 +0.3 N.D. N.D.
carbon source D-Gluconic Acid (C) -0.6 +0.5 +0.2 N.D. N.D.
stress Lomefloxacin 0.012 mM -0.5 +0.5 +0.2 N.D. N.D.
carbon source D-Glucose (C) -0.7 +0.5 +0.4 N.D. N.D.
carbon source L-Proline (C) -0.6 +0.4 +0.4 N.D. N.D.
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.2 +0.6 +0.4 N.D. N.D.
carbon source L-Fucose (C) -0.3 +0.8 +0.3 N.D. N.D.
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.2 +0.6 +0.4 N.D. N.D.
carbon source D-Xylose (C) -0.4 +0.8 +0.5 N.D. N.D.
carbon source L-Lactate (C) -0.4 +0.8 +0.6 N.D. N.D.
stress sodium fluoride 100 mM -0.3 +0.9 +0.7 N.D. N.D.
carbon source L-Malic (C) -0.4 +0.9 +0.8 N.D. N.D.
stress Dimethyl Sulfoxide 5 vol% +0.4 +0.5 +0.7 N.D. N.D.
stress A22 0.02 mg/ml +0.4 +0.6 +0.7 N.D. N.D.
stress Fusidic 0.025 mg/ml +0.9 +0.6 +0.2 N.D. N.D.
stress Thallium(I) acetate 0.001 mg/ml -0.3 +1.1 +1.2 N.D. N.D.
carbon source D-Galacturonic Acid (C) +0.7 +0.8 +0.8 N.D. N.D.
carbon source D-Galacturonic Acid (C) +0.7 +1.3 +1.0 N.D. N.D.
stress Cisplatin 0.003 mg/ml -0.1 +1.6 +1.7 N.D. N.D.
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