Fitness for 5 genes in Herbaspirillum seropedicae SmR1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 244 experiments or choose conditions or try the comparative fitness browser

500 ntHSERO_RS15585 and HSERO_RS15590 are separated by 30 nucleotidesHSERO_RS15590 and HSERO_RS15595 are separated by 1 nucleotidesHSERO_RS15595 and HSERO_RS15600 are separated by 151 nucleotidesHSERO_RS15600 and HSERO_RS15605 are separated by 161 nucleotides HSERO_RS15585: HSERO_RS15585 - cobalamin biosynthesis protein CbiX, at 3,560,679 to 3,561,044 _RS15585 HSERO_RS15590: HSERO_RS15590 - permease, at 3,561,075 to 3,562,205 _RS15590 HSERO_RS15595: HSERO_RS15595 - permease, at 3,562,207 to 3,563,337 _RS15595 HSERO_RS15600: HSERO_RS15600 - cytosol aminopeptidase, at 3,563,489 to 3,565,009 _RS15600 HSERO_RS15605: HSERO_RS15605 - dienelactone hydrolase, at 3,565,171 to 3,566,046 _RS15605
Group Condition HSERO_RS15585 HSERO_RS15590 HSERO_RS15595 HSERO_RS15600 HSERO_RS15605
vitamin With vitamins t2 -5.0 N.D. N.D. -3.6 +0.0
vitamin No vitamins t2 -4.1 N.D. N.D. -4.1 +0.1
carbon source D-Glucose-6-Phosphate (C) -3.7 N.D. N.D. -3.0 +0.1
nutrient Min media with glucose -2.0 N.D. N.D. -4.3 -0.2
carbon source D-Galactose (C) -5.5 N.D. N.D. -0.6 -0.1
carbon source Carbon source D-Glucose 20 mM -2.1 N.D. N.D. -4.2 +0.2
carbon source D-Glucose (C) -4.1 N.D. N.D. -2.2 +0.2
carbon source Carbon source D-Glucose 20 mM -2.0 N.D. N.D. -3.9 +0.3
carbon source L-Arabinose (C) -4.4 N.D. N.D. -0.6 -0.3
nutrient Min media with glucose -2.1 N.D. N.D. -3.3 +0.0
carbon source L-Proline (C) -5.1 N.D. N.D. -0.1 -0.1
nitrogen source nitrate (N); high aeration -5.2 N.D. N.D. -0.1 -0.0
carbon source D-Glucose (C) -3.3 N.D. N.D. -1.9 -0.2
vitamin No vitamins t1 -2.2 N.D. N.D. -3.2 +0.1
carbon source D-Lactate (C) -5.8 N.D. N.D. +0.6 -0.0
nitrogen source nitrate (N); low aeration -4.5 N.D. N.D. -0.6 -0.1
nitrogen source nitrate (N); high aeration -5.0 N.D. N.D. -0.2 +0.1
vitamin With vitamins t1 -1.9 N.D. N.D. -3.2 -0.0
carbon source L-Proline (C) -5.3 N.D. N.D. +0.1 +0.1
carbon source L-Glutamine (C) -4.9 N.D. N.D. -0.2 +0.2
nutrient L-Serine -1.6 N.D. N.D. -3.4 +0.1
carbon source D-Glucose-6-Phosphate (C) -2.7 N.D. N.D. -2.3 +0.2
carbon source L-Glutamine (C) -4.8 N.D. N.D. +0.0 +0.0
nutrient L-Serine -1.9 N.D. N.D. -2.6 -0.1
carbon source succinate (C) -5.1 N.D. N.D. +0.3 +0.1
carbon source pyruvate (C) -3.5 N.D. N.D. -1.0 +0.1
carbon source L-Malic (C) -5.3 N.D. N.D. +0.7 +0.2
carbon source succinate (C) -4.4 N.D. N.D. +0.5 +0.0
carbon source D-Lactate (C) -4.4 N.D. N.D. +0.4 +0.1
carbon source L-Lactate (C) -4.1 N.D. N.D. +0.6 +0.2
remove
HSERO_RS15585
plot		 remove
HSERO_RS15590
plot		 remove
HSERO_RS15595		 remove
HSERO_RS15600
plot		 remove
HSERO_RS15605
plot