Fitness for 5 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

Or view all 244 experiments or choose conditions or try the comparative fitness browser

Group	Condition	HSERO_RS14095	HSERO_RS14100	HSERO_RS14105	HSERO_RS14110	HSERO_RS14115
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.6	-0.7	-0.5	-1.0	-0.4
r2a control	R2A control	-0.4	-0.4	-0.3	-0.3	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	-0.3	-0.7	-0.4	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-0.3	-0.4	-0.6	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.3	-0.3	-0.3	-0.5	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-0.1	-0.5	-0.4	-0.5
agar plate interaction control	Taped volatile agar plate with no fungus	-0.3	-0.3	-0.7	-0.3	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	-0.2	-0.3	-0.3	-0.5
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.1	-0.2	-0.2	-0.6	-0.2
agar plate interaction control	Taped volatile agar plate with no fungus	-0.3	-0.3	-0.1	-0.3	-0.3
supernatant control	Vogels_fungal_media 0.1X	-0.2	-0.3	-0.3	-0.2	-0.2
r2a control	R2A control	-0.2	-0.2	-0.2	-0.2	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	-0.2	-0.3	+0.0	-0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.1	-0.1	-0.8	-0.1	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.2	-0.5	-0.1	-0.2
carbon source	L-Glutamine (C)	-0.1	+0.1	-0.5	-0.3	-0.2
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.2	-0.3	-0.8	+0.2	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	-0.2	-0.1	-0.4	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-0.1	+0.9	-0.6	-0.4
carbon source	Glycerol (C)	-0.0	-0.1	+0.7	-0.0	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-0.2	+0.9	-0.2	-0.1
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.0	-0.1	-0.6	+0.5	+0.6
carbon source	D,L-Lactate (C)	+0.0	+0.1	+0.4	+0.4	-0.3
plant	Control soil assay; outgrowth in LB	+0.2	+0.3	-0.3	+0.2	+0.3
carbon source	D-Glucose (C)	+0.1	+0.0	+0.3	+0.6	-0.3
carbon source	D-Galactose (C)	+0.0	+0.1	+0.9	-0.1	-0.1
carbon source	Xylitol (C)	+0.0	+0.2	+0.4	+0.7	-0.2
carbon source	L-Asparagine (C)	+0.1	+0.2	+0.6	+0.3	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.1	+1.3	-0.2	+0.3
carbon source	D-Sorbitol (C)	+0.0	+0.1	+0.7	+0.2	+0.4