Fitness for 5 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS13560	HSERO_RS13565	HSERO_RS13570	HSERO_RS13575	HSERO_RS13580
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-2.4	+0.1	+0.0	+0.1	-0.8
micoeukaryotes	Dictyostellum sp.mixed culture-2	-3.0	-0.1	+0.0	+0.3	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.4	+0.0	-0.1	-0.3	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.6	+0.0	-0.1	-0.6	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.1	-0.1	-0.3	-0.5	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.6	-0.2	-0.3	-0.1	-0.2
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days	-2.2	+0.1	+0.1	+0.1	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-2.1	+0.0	+0.2	-0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.8	-0.2	-0.1	-0.2	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.8	+0.4	+0.0	-0.2	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.7	+0.2	-0.1	-0.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.8	-0.1	+0.4	-0.2	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.5	+0.2	+0.0	+0.3	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.7	-0.5	+0.5	+0.0	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.7	+0.3	+0.4	-0.3	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.4	+0.2	+0.2	+0.3	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.6	+0.5	-0.1	-0.2	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.5	+0.6	+0.1	-0.5	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-2.0	-0.2	+1.1	+0.0	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.3	-0.1	+0.1	+0.2	+0.8
control	NoPredeControl	-2.0	+0.1	+0.1	+0.2	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-2.2	+0.1	+0.2	-0.3	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.8	-0.1	+0.0	+0.3	+0.5
micoeukaryotes	C.elegans, mixed culture-1	-2.1	+0.2	+0.3	+0.2	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.5	+0.3	+0.2	-0.1	+0.4
stress	Cobalt chloride 0.2 mM	-1.2	+0.4	+0.2	+0.6	+0.2
carbon source	Carbon source Phenylacetic 5 mM	-1.2	+0.7	+0.5	+0.5	+0.3
carbon source	Carbon source Phenylacetic 5 mM	-0.8	+0.8	+0.5	+0.6	+0.2
stress	Fusidic 0.025 mg/ml	+1.4	-0.5	+0.0	+0.6	+0.3
stress	Lomefloxacin 0.012 mM	+3.2	-0.4	-0.3	-0.1	-0.5