Fitness for 5 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS10910	HSERO_RS10915	HSERO_RS10920	HSERO_RS10925	HSERO_RS10930
stress	Thallium(I) acetate 0.001 mg/ml	-2.2	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-2.0	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.9	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.3	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-1.3	N.D.	N.D.	N.D.	N.D.
agar plate interaction control	Taped volatile agar plate with no fungus	-1.2	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.2	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.2	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.2	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.1	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.1	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-1.1	N.D.	N.D.	N.D.	N.D.
stress	Cisplatin 0.003 mg/ml	-1.1	N.D.	N.D.	N.D.	N.D.
carbon source	D,L-Lactate (C)	-1.0	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.9	N.D.	N.D.	N.D.	N.D.
carbon source	L-Lactate (C)	-0.9	N.D.	N.D.	N.D.	N.D.
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.9	N.D.	N.D.	N.D.	N.D.
carbon source	L-Malic (C)	-0.9	N.D.	N.D.	N.D.	N.D.
micoeukaryotes	C.elegans, mixed culture-2	-0.8	N.D.	N.D.	N.D.	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8	N.D.	N.D.	N.D.	N.D.
agar plate interaction control	Taped volatile agar plate with no fungus	-0.8	N.D.	N.D.	N.D.	N.D.
carbon source	D-Lactate (C)	-0.8	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.8	N.D.	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.7	N.D.	N.D.	N.D.	N.D.
carbon source	L-Malic (C)	-0.7	N.D.	N.D.	N.D.	N.D.
stress	Sisomicin 0.125 mg/ml	+0.7	N.D.	N.D.	N.D.	N.D.
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 3 days	+1.1	N.D.	N.D.	N.D.	N.D.
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+1.6	N.D.	N.D.	N.D.	N.D.
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 8 days	+1.8	N.D.	N.D.	N.D.	N.D.
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+2.0	N.D.	N.D.	N.D.	N.D.