Fitness for 5 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS10890	HSERO_RS10895	HSERO_RS10900	HSERO_RS10905	HSERO_RS10910
stress	Thallium(I) acetate 0.001 mg/ml	N.D.	N.D.	N.D.	N.D.	-2.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	N.D.	N.D.	N.D.	N.D.	-2.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	N.D.	N.D.	N.D.	N.D.	-1.9
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	N.D.	N.D.	N.D.	-1.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	N.D.	N.D.	N.D.	N.D.	-1.3
agar plate interaction control	Taped volatile agar plate with no fungus	N.D.	N.D.	N.D.	N.D.	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	N.D.	N.D.	N.D.	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	N.D.	N.D.	N.D.	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	N.D.	N.D.	N.D.	N.D.	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	N.D.	N.D.	N.D.	-1.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	N.D.	N.D.	N.D.	-1.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	N.D.	N.D.	N.D.	N.D.	-1.1
stress	Cisplatin 0.003 mg/ml	N.D.	N.D.	N.D.	N.D.	-1.1
carbon source	D,L-Lactate (C)	N.D.	N.D.	N.D.	N.D.	-1.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	N.D.	N.D.	N.D.	N.D.	-0.9
carbon source	L-Lactate (C)	N.D.	N.D.	N.D.	N.D.	-0.9
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	N.D.	N.D.	N.D.	N.D.	-0.9
carbon source	L-Malic (C)	N.D.	N.D.	N.D.	N.D.	-0.9
micoeukaryotes	C.elegans, mixed culture-2	N.D.	N.D.	N.D.	N.D.	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	N.D.	N.D.	N.D.	-0.8
agar plate interaction control	Taped volatile agar plate with no fungus	N.D.	N.D.	N.D.	N.D.	-0.8
carbon source	D-Lactate (C)	N.D.	N.D.	N.D.	N.D.	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	N.D.	N.D.	N.D.	N.D.	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	N.D.	N.D.	N.D.	N.D.	-0.7
carbon source	L-Malic (C)	N.D.	N.D.	N.D.	N.D.	-0.7
stress	Sisomicin 0.125 mg/ml	N.D.	N.D.	N.D.	N.D.	+0.7
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 3 days	N.D.	N.D.	N.D.	N.D.	+1.1
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	N.D.	N.D.	N.D.	N.D.	+1.6
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 8 days	N.D.	N.D.	N.D.	N.D.	+1.8
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	N.D.	N.D.	N.D.	N.D.	+2.0