Fitness for 5 genes in Herbaspirillum seropedicae SmR1

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500 ntHSERO_RS05215 and HSERO_RS05220 are separated by 323 nucleotidesHSERO_RS05220 and HSERO_RS05225 are separated by 192 nucleotidesHSERO_RS05225 and HSERO_RS05230 are separated by 19 nucleotidesHSERO_RS05230 and HSERO_RS05235 are separated by 353 nucleotides HSERO_RS05215: HSERO_RS05215 - LysR family transcriptional regulator, at 1,154,748 to 1,155,689 _RS05215 HSERO_RS05220: HSERO_RS05220 - porin, at 1,156,013 to 1,157,137 _RS05220 HSERO_RS05225: HSERO_RS05225 - L-arabinolactonase (EC 3.1.1.15) (from data), at 1,157,330 to 1,158,208 _RS05225 HSERO_RS05230: HSERO_RS05230 - IclR family transcriptional regulator, at 1,158,228 to 1,159,076 _RS05230 HSERO_RS05235: HSERO_RS05235 - L-fuconate dehydratase (EC 4.2.1.68) (from data), at 1,159,430 to 1,160,707 _RS05235
Group Condition HSERO_RS05215 HSERO_RS05220 HSERO_RS05225 HSERO_RS05230 HSERO_RS05235
vitamin No vitamins t2 -5.3 -0.5 -1.9 N.D. -0.2
carbon source L-Arabinose (C) -2.1 -1.6 -3.7 N.D. -0.1
carbon source D-Mannose (C) -3.9 -1.5 -2.0 N.D. +0.1
carbon source L-mannose (C) -5.6 -0.6 -0.7 N.D. -0.0
carbon source D-Glucose-6-Phosphate (C) -4.6 -0.9 -0.7 N.D. -0.2
carbon source L-mannose (C) -5.5 -0.8 -0.3 N.D. +0.1
vitamin With vitamins t2 -4.9 -0.4 -1.2 N.D. -0.0
vitamin No vitamins t1 -4.1 -0.5 -1.4 N.D. -0.0
carbon source L-Arabinose (C) -1.8 -1.9 -1.9 N.D. -0.4
nutrient Min media with glucose -5.4 -0.4 +0.0 N.D. -0.0
carbon source D-Mannose (C) -4.5 -1.3 -0.2 N.D. +0.3
carbon source D-Glucose-6-Phosphate (C) -4.3 -0.8 -0.4 N.D. -0.1
nutrient Min media with glucose -4.8 -0.2 -0.4 N.D. -0.2
carbon source D-Glucose (C) -3.5 -0.1 -1.6 N.D. -0.3
vitamin With vitamins t1 -4.2 -0.5 -0.9 N.D. +0.0
nutrient L-Histidine -4.4 -0.6 -0.2 N.D. -0.1
carbon source D-Glucose (C) -4.1 +0.2 -1.8 N.D. +0.3
nutrient L-Serine -3.7 -0.3 -0.7 N.D. -0.3
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -2.2 -2.8 +0.3 N.D. +0.0
nutrient L-Histidine -3.9 -0.6 -0.1 N.D. -0.0
nutrient L-Serine -3.6 -0.4 -0.3 N.D. -0.1
carbon source D-Glucose (C) -3.6 +0.1 -1.0 N.D. +0.1
carbon source Carbon source D-Glucose 20 mM -4.1 +0.1 -0.3 N.D. +0.0
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -2.4 -1.9 +0.1 N.D. +0.1
carbon source Carbon source D-Glucose 20 mM -3.6 -0.1 -0.5 N.D. +0.1
carbon source D-Glucose (C) -3.7 +0.2 -0.7 N.D. +0.2
carbon source L-Fucose (C) -1.8 +1.2 +0.9 N.D. -2.6
carbon source L-Fucose (C) -1.7 +1.2 +0.8 N.D. -2.2
carbon source L-Fucose (C) +5.0 +0.3 +0.7 N.D. +0.1
carbon source L-Fucose (C) +5.0 +0.3 +0.6 N.D. +0.2
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