Fitness for 5 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS02455	HSERO_RS02460	HSERO_RS02465	HSERO_RS02470	HSERO_RS02475
stress	Cisplatin 0.003 mg/ml	+0.2	-0.1	-3.2	-0.4	-0.8
control	NoPredeControl	-0.2	+0.4	+0.2	-0.2	-3.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.4	-0.6	-0.2	-1.1	-0.6
carbon source	L-Proline (C)	+0.1	-0.2	+0.0	-1.5	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.8	-0.2	-0.2	-0.9	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.7	-0.2	-0.4	-0.5	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.5	-0.6	-0.2	-0.1	-1.0
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 3 days	+0.2	-0.1	-0.1	-1.5	-0.8
carbon source	D-Galactose (C)	+0.1	-0.2	-0.2	-1.3	-0.4
vitamin	No vitamins t1	-0.2	-0.2	-0.1	-1.1	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6	-0.0	-0.1	+0.3	-1.5
stress	sodium fluoride 100 mM	+0.1	-0.4	-0.4	-1.1	-0.0
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 3 days	+0.3	+0.0	-0.1	-1.6	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	+0.3	-0.1	-1.0	-0.7
carbon source	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM	-0.0	+0.2	-0.1	-1.4	-0.4
vitamin	No vitamins t2	-0.3	-0.0	-0.1	-1.5	+0.2
carbon source	D,L-Lactate (C)	+0.0	+0.1	+0.1	-1.1	-0.7
carbon source	Carbon source 2-Deoxy-D-Ribose 5 mM	-0.1	+0.3	-0.0	-1.8	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	+0.5	-0.6	-0.8	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-0.5	-0.1	+0.6	-0.9
carbon source	L-mannose (C)	+0.3	+0.3	+0.1	-1.4	-0.1
carbon source	L-Rhamnose (C)	+0.2	+0.2	-0.4	-1.0	+0.3
carbon source	L-Proline (C)	+0.4	-0.0	-0.2	-1.1	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	-0.0	-0.3	+1.0	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6	+1.3	-0.3	-0.6	+0.1
carbon source	L-Rhamnose (C)	+0.5	-0.3	-0.2	-0.9	+0.6
carbon source	D-Glucose (C)	+0.3	+0.3	+0.0	-1.2	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	+0.5	-0.3	-0.1	+0.6
carbon source	L-Lactate (C)	+0.4	+0.1	-0.0	-1.1	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.6	+0.3	-0.1	-0.6	+0.5