Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS17350 and HMPREF1078_RS17355 are separated by 78 nucleotidesHMPREF1078_RS17355 and HMPREF1078_RS17360 are separated by 89 nucleotidesHMPREF1078_RS17360 and HMPREF1078_RS17365 are separated by 54 nucleotidesHMPREF1078_RS17365 and HMPREF1078_RS17370 are separated by 42 nucleotides HMPREF1078_RS17350: HMPREF1078_RS17350 - tRNA-Lys, at 23,884 to 23,959 _RS17350 HMPREF1078_RS17355: HMPREF1078_RS17355 - AI-2E family transporter, at 24,038 to 25,186 _RS17355 HMPREF1078_RS17360: HMPREF1078_RS17360 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase, at 25,276 to 26,733 _RS17360 HMPREF1078_RS17365: HMPREF1078_RS17365 - LytTR family DNA-binding domain-containing protein, at 26,788 to 27,501 _RS17365 HMPREF1078_RS17370: HMPREF1078_RS17370 - histidine kinase, at 27,544 to 28,593 _RS17370
Group Condition HMPREF1078_RS17350 HMPREF1078_RS17355 HMPREF1078_RS17360 HMPREF1078_RS17365 HMPREF1078_RS17370
carbon source Sucrose 10 mg/mL (C) N.D. -0.1 -0.4 -0.1 -1.3
carbon source D-Xylose 10 mg/mL (C) N.D. +0.1 -0.1 -0.1 -1.3
carbon source D-Xylose 10 mg/mL (C) N.D. -0.0 -0.1 +0.3 -1.4
carbon source Xylan from corncob 2.5 mg/mL (C) N.D. +0.0 -0.1 +0.1 -0.8
carbon source Xylan from corncob 2.5 mg/mL (C) N.D. +0.2 -0.3 +0.0 -0.8
carbon source D-Maltose 10 mg/mL (C) N.D. +0.2 -0.4 -0.0 -0.5
carbon source complex media GAM 1 x (C) N.D. -0.2 -0.1 -0.1 -0.1
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) N.D. -0.0 +0.3 -0.1 -0.6
carbon source complex media RCM 1 x (C) N.D. -0.1 +0.2 -0.2 -0.2
carbon source D-Maltose 10 mg/mL (C) N.D. +0.1 +0.2 -0.6 +0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) N.D. -0.1 -0.0 +0.3 -0.3
carbon source Lentilan from mushroom 2.5 mg/mL (C) N.D. +0.2 +0.2 +0.0 -0.5
carbon source complex media Yeast Extract 1 x (C) N.D. +0.1 +0.2 +0.1 -0.4
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) N.D. +0.1 -0.1 +0.2 -0.2
carbon source Sucrose 10 mg/mL (C) N.D. +0.1 -0.1 +0.2 -0.2
carbon source Lentilan from mushroom 2.5 mg/mL (C) N.D. -0.1 +0.2 +0.1 -0.2
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) N.D. +0.1 -0.2 +0.2 -0.0
carbon source D-Glucose 10 mg/mL (C) N.D. +0.1 +0.2 +0.1 -0.1
carbon source complex media Yeast Extract 1 x (C) N.D. -0.0 +0.1 +0.3 -0.0
carbon source .-Glucan from yeast 2.5 mg/mL (C) N.D. +0.0 +0.0 +0.2 +0.3
carbon source complex media MRS 1 x (C) N.D. +0.0 +0.0 +0.1 +0.3
carbon source D-Galactose 10 mg/mL (C) N.D. -0.0 +0.2 +0.0 +0.4
carbon source D-Raffinose 10 mg/mL (C) N.D. +0.2 +0.0 +0.1 +0.3
carbon source D-Mannose 10 mg/mL (C) N.D. +0.2 +0.3 +0.1 +0.2
carbon source .-Glucan from yeast 2.5 mg/mL (C) N.D. +0.1 +0.0 +0.4 +0.2
carbon source D-Galactose 10 mg/mL (C) N.D. +0.0 +0.3 +0.0 +0.5
carbon source D-Glucose 10 mg/mL (C) N.D. +0.2 +0.2 +0.1 +0.4
carbon source complex media MRS 1 x (C) N.D. +0.1 +0.1 +0.1 +0.7
carbon source NAG 10 mg/mL (C) N.D. +0.3 +0.2 -0.1 +0.9
carbon source NAG 10 mg/mL (C) N.D. +0.4 +0.3 +0.2 +0.8
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