Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS16345 and HMPREF1078_RS16350 are separated by 1155 nucleotidesHMPREF1078_RS16350 and HMPREF1078_RS16355 are separated by 18 nucleotidesHMPREF1078_RS16355 and HMPREF1078_RS16360 are separated by 17 nucleotidesHMPREF1078_RS16360 and HMPREF1078_RS16365 are separated by 146 nucleotides HMPREF1078_RS16345: HMPREF1078_RS16345 - RagB/SusD family nutrient uptake outer membrane protein, at 401,155 to 402,948 _RS16345 HMPREF1078_RS16350: HMPREF1078_RS16350 - basic secretory protein-like protein, at 404,104 to 405,210 _RS16350 HMPREF1078_RS16355: HMPREF1078_RS16355 - GH92 family glycosyl hydrolase, at 405,229 to 407,556 _RS16355 HMPREF1078_RS16360: HMPREF1078_RS16360 - GH92 family glycosyl hydrolase, at 407,574 to 409,862 _RS16360 HMPREF1078_RS16365: HMPREF1078_RS16365 - GH92 family glycosyl hydrolase, at 410,009 to 412,333 _RS16365
Group Condition HMPREF1078_RS16345 HMPREF1078_RS16350 HMPREF1078_RS16355 HMPREF1078_RS16360 HMPREF1078_RS16365
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.3 -1.1 -0.3 -0.1 -0.3
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.4 -1.0 -0.3 -0.1 -0.1
carbon source complex media RCM 1 x (C) +0.6 -0.7 -0.4 -0.0 -0.3
carbon source complex media RCM 1 x (C) +0.6 -0.3 -0.2 -0.3 -0.1
carbon source complex media Yeast Extract 1 x (C) -0.6 +0.2 +0.2 +0.1 -0.0
carbon source complex media GAM 1 x (C) +0.5 -0.5 +0.0 +0.1 -0.1
carbon source complex media Yeast Extract 1 x (C) -0.5 +0.1 +0.2 +0.1 +0.1
carbon source complex media GAM 1 x (C) +0.6 -0.4 +0.1 +0.0 -0.1
carbon source Beta-Lactose 10 mg/mL (C) -0.4 +0.4 +0.2 -0.0 +0.1
carbon source D-Glucose 10 mg/mL (C) -0.6 +0.5 +0.3 +0.1 +0.1
carbon source D-Glucose 10 mg/mL (C) -0.7 +0.5 +0.4 +0.1 +0.2
carbon source Lentilan from mushroom 2.5 mg/mL (C) -0.8 +0.6 +0.4 +0.1 +0.1
carbon source complex media marine_broth_2216 1 x (C) -0.3 +0.5 +0.2 +0.1 +0.0
carbon source D-Maltose 10 mg/mL (C) -0.4 +0.8 +0.2 +0.0 -0.1
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.1 +0.7 -0.0 +0.2 -0.2
carbon source D-Galactose 10 mg/mL (C) -0.4 +0.4 +0.3 +0.2 +0.1
carbon source Lentilan from mushroom 2.5 mg/mL (C) -0.8 +0.7 +0.3 +0.2 +0.3
carbon source NAG 10 mg/mL (C) -0.4 +0.6 +0.3 +0.1 +0.1
carbon source Sucrose 10 mg/mL (C) -0.3 +0.6 +0.2 +0.2 +0.1
carbon source D-Raffinose 10 mg/mL (C) -0.3 +0.7 +0.3 +0.2 +0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.8 +1.3 +0.2 +0.3 +0.1
carbon source Xylan from corncob 2.5 mg/mL (C) -0.4 +1.0 +0.3 +0.2 +0.1
carbon source D-Raffinose 10 mg/mL (C) -0.2 +0.8 +0.4 +0.2 +0.0
carbon source D-Xylose 10 mg/mL (C) -0.6 +1.3 +0.4 +0.1 +0.1
carbon source Xylan from corncob 2.5 mg/mL (C) -0.4 +1.1 +0.3 +0.1 +0.1
carbon source D-Xylose 10 mg/mL (C) -0.3 +1.1 +0.3 +0.2 +0.1
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.2 +1.3 +0.0 +0.3 +0.0
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.8 +1.5 +0.4 +0.1 +0.3
carbon source D-Maltose 10 mg/mL (C) -0.3 +1.0 +0.4 +0.2 +0.2
carbon source Sucrose 10 mg/mL (C) -0.7 +1.8 +0.6 +0.3 +0.3
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