Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS16065 and HMPREF1078_RS16070 are separated by 98 nucleotidesHMPREF1078_RS16070 and HMPREF1078_RS16075 are separated by 63 nucleotidesHMPREF1078_RS16075 and HMPREF1078_RS16080 are separated by 98 nucleotidesHMPREF1078_RS16080 and HMPREF1078_RS16085 are separated by 127 nucleotides HMPREF1078_RS16065: HMPREF1078_RS16065 - class II fructose-1,6-bisphosphate aldolase, at 337,142 to 338,140 _RS16065 HMPREF1078_RS16070: HMPREF1078_RS16070 - DUF4923 family protein, at 338,239 to 338,859 _RS16070 HMPREF1078_RS16075: HMPREF1078_RS16075 - AAA family ATPase, at 338,923 to 341,049 _RS16075 HMPREF1078_RS16080: HMPREF1078_RS16080 - TrkA C-terminal domain-containing protein, at 341,148 to 342,746 _RS16080 HMPREF1078_RS16085: HMPREF1078_RS16085 - tRNA pseudouridine(38-40) synthase TruA, at 342,874 to 343,638 _RS16085
Group Condition HMPREF1078_RS16065 HMPREF1078_RS16070 HMPREF1078_RS16075 HMPREF1078_RS16080 HMPREF1078_RS16085
carbon source D-Xylose 10 mg/mL (C) N.D. +0.1 -0.0 -2.7 -0.1
carbon source D-Maltose 10 mg/mL (C) N.D. +0.3 -0.1 -3.2 +0.4
carbon source Xylan from corncob 2.5 mg/mL (C) N.D. +0.2 -0.2 -2.2 -0.1
carbon source D-Xylose 10 mg/mL (C) N.D. +0.1 -0.1 -2.0 +0.2
carbon source Xylan from corncob 2.5 mg/mL (C) N.D. -0.1 -0.2 -1.4 +0.4
carbon source Dextrin from potato starch 2.5 mg/mL (C) N.D. -0.1 -0.1 -1.2 +0.3
carbon source D-Raffinose 10 mg/mL (C) N.D. +0.1 -0.1 -1.1 +0.2
carbon source Sucrose 10 mg/mL (C) N.D. +0.3 -0.2 -1.7 +0.7
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) N.D. +0.1 -0.1 -0.6 -0.2
carbon source Sucrose 10 mg/mL (C) N.D. +0.1 +0.0 -0.8 -0.0
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) N.D. -0.1 -0.1 -0.0 -0.3
carbon source complex media Yeast Extract 1 x (C) N.D. +0.0 -0.1 -0.4 -0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) N.D. +0.3 -0.2 -0.6 +0.0
carbon source .-Glucan from yeast 2.5 mg/mL (C) N.D. +0.2 -0.2 -0.3 -0.2
carbon source complex media BHI 1 x (C) N.D. +0.1 -0.1 -0.3 -0.0
carbon source Beta-Lactose 10 mg/mL (C) N.D. +0.3 -0.1 -0.3 -0.1
carbon source complex media Columbia 1 x (C) N.D. +0.2 +0.1 -0.4 +0.1
carbon source NAG 10 mg/mL (C) N.D. -0.1 -0.0 -0.2 +0.4
carbon source D-Mannose 10 mg/mL (C) N.D. +0.1 +0.1 -0.5 +0.3
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) N.D. +0.2 +0.2 +0.1 -0.3
carbon source D-Galactose 10 mg/mL (C) N.D. +0.3 -0.0 -0.5 +0.4
carbon source D-Mannose 10 mg/mL (C) N.D. +0.1 +0.1 -0.4 +0.5
carbon source NAG 10 mg/mL (C) N.D. +0.0 +0.1 -0.2 +0.4
carbon source D-Glucose 10 mg/mL (C) N.D. +0.0 -0.1 -0.4 +0.8
carbon source D-Glucose 10 mg/mL (C) N.D. +0.2 +0.1 -0.5 +0.5
carbon source complex media MRS 1 x (C) N.D. +0.0 -0.0 -0.4 +0.8
carbon source complex media GAM 1 x (C) N.D. -0.2 -0.0 +0.3 +0.4
carbon source D-Galactose 10 mg/mL (C) N.D. +0.2 +0.2 -0.2 +0.4
carbon source D-Maltose 10 mg/mL (C) N.D. -0.2 +0.0 -0.3 +1.1
carbon source complex media GAM 1 x (C) N.D. +0.0 -0.0 +0.1 +0.7
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