Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS12435 and HMPREF1078_RS12440 are separated by 497 nucleotidesHMPREF1078_RS12440 and HMPREF1078_RS12445 are separated by 76 nucleotidesHMPREF1078_RS12445 and HMPREF1078_RS12450 are separated by 378 nucleotidesHMPREF1078_RS12450 and HMPREF1078_RS12455 are separated by 77 nucleotides HMPREF1078_RS12435: HMPREF1078_RS12435 - efflux RND transporter permease subunit, at 481,589 to 484,855 _RS12435 HMPREF1078_RS12440: HMPREF1078_RS12440 - O-antigen ligase family protein, at 485,353 to 487,011 _RS12440 HMPREF1078_RS12445: HMPREF1078_RS12445 - heparinase II/III family protein, at 487,088 to 488,917 _RS12445 HMPREF1078_RS12450: HMPREF1078_RS12450 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit, at 489,296 to 492,514 _RS12450 HMPREF1078_RS12455: HMPREF1078_RS12455 - transcriptional regulator, at 492,592 to 494,649 _RS12455
Group Condition HMPREF1078_RS12435 HMPREF1078_RS12440 HMPREF1078_RS12445 HMPREF1078_RS12450 HMPREF1078_RS12455
carbon source D-Xylose 10 mg/mL (C) -0.0 -0.1 -0.0 -1.8 -0.1
carbon source Xylan from corncob 2.5 mg/mL (C) +0.0 -0.0 +0.0 -1.8 +0.1
carbon source Sucrose 10 mg/mL (C) +0.1 +0.1 -0.1 -2.1 +0.5
carbon source complex media BHI 1 x (C) +0.1 +0.1 +0.0 -1.7 +0.0
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.3 +0.1 -0.1 -0.5 -0.5
carbon source D-Xylose 10 mg/mL (C) -0.1 -0.0 +0.0 -1.1 -0.0
carbon source Xylan from corncob 2.5 mg/mL (C) -0.1 +0.3 -0.1 -1.3 +0.0
carbon source D-Galactose 10 mg/mL (C) +0.1 +0.0 -0.1 -0.6 -0.4
carbon source D-Galactose 10 mg/mL (C) +0.0 -0.1 -0.1 -0.4 -0.3
carbon source complex media MRS 1 x (C) +0.0 +0.0 -0.1 -0.3 -0.5
carbon source D-Mannose 10 mg/mL (C) -0.1 +0.0 +0.0 -0.4 -0.2
carbon source D-Maltose 10 mg/mL (C) +0.1 +0.1 -0.1 -1.0 +0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.1 -0.1 +0.0 -0.2 -0.3
carbon source complex media Brucella 1 x (C) +0.1 -0.0 -0.0 -0.7 +0.0
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) +0.1 -0.1 -0.1 -0.5 -0.0
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.1 +0.0 +0.1 -0.6 -0.1
carbon source complex media BHI 1 x (C) +0.0 +0.1 +0.1 -0.8 +0.1
carbon source complex media marine_broth_2216 1 x (C) -0.0 +0.2 -0.1 -0.4 -0.1
carbon source D-Raffinose 10 mg/mL (C) -0.1 +0.0 -0.1 -0.5 +0.1
carbon source Lentilan from mushroom 2.5 mg/mL (C) +0.1 +0.1 +0.3 -0.7 -0.2
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.0 +0.2 -0.1 -0.3 -0.2
carbon source D-Raffinose 10 mg/mL (C) -0.0 +0.0 -0.1 -0.5 +0.2
carbon source Sucrose 10 mg/mL (C) +0.1 -0.0 -0.2 -0.4 +0.2
carbon source complex media GAM 1 x (C) -0.2 +0.1 +0.0 +0.2 -0.4
carbon source complex media GAM 1 x (C) -0.1 +0.0 +0.1 +0.3 -0.5
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.1 -0.0 -0.2 +0.2 -0.2
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.2 -0.0 +0.3 -0.5 -0.1
carbon source complex media RCM 1 x (C) +0.1 -0.1 -0.1 +0.5 -0.1
carbon source D-Maltose 10 mg/mL (C) +0.2 +0.1 +0.5 -0.6 +0.2
carbon source complex media Columbia 1 x (C) +0.1 -0.1 +0.2 +0.4 +0.1
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