Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS12195 and HMPREF1078_RS12200 are separated by 4 nucleotidesHMPREF1078_RS12200 and HMPREF1078_RS12205 are separated by 84 nucleotidesHMPREF1078_RS12205 and HMPREF1078_RS12210 are separated by 36 nucleotidesHMPREF1078_RS12210 and HMPREF1078_RS12215 are separated by 9 nucleotides HMPREF1078_RS12195: HMPREF1078_RS12195 - sodium/solute symporter, at 416,942 to 419,533 _RS12195 HMPREF1078_RS12200: HMPREF1078_RS12200 - dihydrodipicolinate synthase family protein, at 419,538 to 420,449 _RS12200 HMPREF1078_RS12205: HMPREF1078_RS12205 - TonB-dependent receptor, at 420,534 to 423,698 _RS12205 HMPREF1078_RS12210: HMPREF1078_RS12210 - RagB/SusD family nutrient uptake outer membrane protein, at 423,735 to 425,189 _RS12210 HMPREF1078_RS12215: HMPREF1078_RS12215 - dihydrodipicolinate synthase family protein, at 425,199 to 426,137 _RS12215
Group Condition HMPREF1078_RS12195 HMPREF1078_RS12200 HMPREF1078_RS12205 HMPREF1078_RS12210 HMPREF1078_RS12215
carbon source pectate 2.5 mg/mL (C) -0.0 -0.2 -0.0 -0.0 -0.2
carbon source complex media Columbia 1 x (C) -0.0 -0.1 +0.0 -0.0 -0.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.0 +0.1 -0.2 -0.2 -0.1
carbon source complex media marine_broth_2216 1 x (C) -0.1 -0.1 -0.0 -0.1 +0.1
carbon source complex media LB 1 x (C) -0.0 -0.1 +0.1 +0.0 -0.2
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.1 +0.0 -0.0 -0.0 -0.2
carbon source D-Glucose 10 mg/mL (C) -0.0 +0.1 -0.1 +0.1 -0.3
carbon source Sucrose 10 mg/mL (C) +0.1 +0.1 -0.0 +0.1 -0.4
carbon source D-Mannose 10 mg/mL (C) -0.0 +0.1 -0.0 +0.1 -0.1
carbon source complex media Yeast Extract 1 x (C) +0.1 -0.1 -0.2 +0.0 +0.2
carbon source D-Galactose 10 mg/mL (C) -0.0 +0.2 +0.1 +0.1 -0.3
carbon source complex media Brucella 1 x (C) +0.1 +0.1 -0.0 +0.1 -0.1
carbon source complex media MRS 1 x (C) -0.1 +0.2 -0.0 -0.1 +0.0
carbon source Beta-Lactose 10 mg/mL (C) -0.1 +0.3 -0.0 +0.0 -0.1
carbon source NAG 10 mg/mL (C) -0.0 +0.2 -0.0 +0.1 -0.0
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.1 +0.1 +0.0 +0.1 +0.0
carbon source D-Raffinose 10 mg/mL (C) +0.1 +0.3 +0.0 -0.1 -0.1
carbon source complex media RCM 1 x (C) +0.1 -0.0 +0.1 -0.1 +0.2
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.1 -0.0 +0.1 -0.1 +0.2
carbon source pectate 2.5 mg/mL (C) +0.1 -0.1 +0.0 +0.1 +0.2
carbon source D-Galactose 10 mg/mL (C) -0.0 +0.3 +0.0 +0.1 -0.1
carbon source D-Glucose 10 mg/mL (C) +0.0 +0.1 -0.1 +0.0 +0.2
carbon source complex media Yeast Extract 1 x (C) -0.0 +0.0 -0.0 +0.1 +0.2
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.0 -0.0 +0.1 +0.3 +0.0
carbon source D-Xylose 10 mg/mL (C) +0.0 +0.2 +0.1 +0.1 -0.1
carbon source NAG 10 mg/mL (C) +0.1 +0.3 -0.0 +0.1 -0.0
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) +0.1 +0.1 +0.1 -0.1 +0.3
carbon source Xylan from corncob 2.5 mg/mL (C) +0.0 +0.3 +0.1 +0.1 -0.1
carbon source D-Mannose 10 mg/mL (C) +0.0 +0.3 +0.0 +0.1 +0.1
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) +0.0 +0.2 +0.2 +0.1 +0.4
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