Fitness for 5 genes in Parabacteroides merdae CL09T00C40

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 56 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1078_RS11910 and HMPREF1078_RS11915 are separated by 14 nucleotidesHMPREF1078_RS11915 and HMPREF1078_RS11920 are separated by 141 nucleotidesHMPREF1078_RS11920 and HMPREF1078_RS11925 are separated by 181 nucleotidesHMPREF1078_RS11925 and HMPREF1078_RS11930 are separated by 159 nucleotides HMPREF1078_RS11910: HMPREF1078_RS11910 - TonB-dependent receptor, at 335,759 to 338,959 _RS11910 HMPREF1078_RS11915: HMPREF1078_RS11915 - RagB/SusD family nutrient uptake outer membrane protein, at 338,974 to 340,458 _RS11915 HMPREF1078_RS11920: HMPREF1078_RS11920 - GH92 family glycosyl hydrolase, at 340,600 to 342,885 _RS11920 HMPREF1078_RS11925: HMPREF1078_RS11925 - RNA polymerase sigma-70 factor, at 343,067 to 343,633 _RS11925 HMPREF1078_RS11930: HMPREF1078_RS11930 - VOC family protein, at 343,793 to 344,173 _RS11930
Group Condition HMPREF1078_RS11910 HMPREF1078_RS11915 HMPREF1078_RS11920 HMPREF1078_RS11925 HMPREF1078_RS11930
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.0 -0.5 -0.2 -1.6 -1.4
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.2 -0.1 +0.1 -2.4 -0.7
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.0 -0.1 -0.1 -0.4 -1.1
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.1 -0.2 -0.0 -0.3 -1.1
carbon source complex media GAM 1 x (C) +0.0 -0.2 -0.0 +0.0 -1.3
carbon source D-Maltose 10 mg/mL (C) -0.0 -0.2 -0.1 -0.0 -0.9
carbon source complex media GAM 1 x (C) +0.1 -0.4 -0.1 +0.0 -0.8
carbon source D-Xylose 10 mg/mL (C) -0.1 +0.0 -0.1 -0.2 -0.7
carbon source Lentilan from mushroom 2.5 mg/mL (C) +0.1 -0.2 +0.0 -0.1 -0.8
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.0 -0.2 +0.1 -0.2 -0.5
carbon source D-Xylose 10 mg/mL (C) -0.1 -0.3 +0.2 -0.2 -0.5
carbon source Xylan from corncob 2.5 mg/mL (C) -0.1 -0.0 -0.0 +0.2 -0.9
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.0 -0.3 -0.3 -0.2 -0.1
carbon source Sucrose 10 mg/mL (C) -0.0 -0.1 +0.1 -0.1 -0.7
carbon source pectate 2.5 mg/mL (C) +0.3 -0.3 +0.0 -0.0 -0.7
carbon source complex media BHI 1 x (C) +0.1 -0.2 -0.1 -0.0 -0.4
carbon source complex media ABB 1 x (C) -0.1 -0.1 +0.1 -0.1 -0.4
carbon source Xylan from corncob 2.5 mg/mL (C) -0.2 -0.3 +0.0 +0.1 -0.2
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) -0.0 +0.1 +0.2 -0.1 -0.8
carbon source pectate 2.5 mg/mL (C) +0.1 -0.3 +0.1 +0.0 -0.6
carbon source Sucrose 10 mg/mL (C) -0.0 -0.2 +0.1 +0.0 -0.4
carbon source complex media marine_broth_2216 1 x (C) +0.1 -0.1 +0.0 +0.1 -0.6
carbon source complex media LB 1 x (C) +0.1 -0.3 +0.1 +0.1 -0.4
carbon source complex media Brucella 1 x (C) +0.1 -0.2 +0.1 -0.1 -0.3
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.0 +0.0 +0.1 +0.1 -0.6
carbon source complex media marine_broth_2216 1 x (C) +0.1 -0.4 +0.2 -0.0 -0.1
carbon source NAG 10 mg/mL (C) -0.1 -0.1 -0.2 -0.1 +0.6
carbon source D-Mannose 10 mg/mL (C) -0.1 -0.1 -0.0 +0.1 +0.5
carbon source Beta-Lactose 10 mg/mL (C) -0.0 -0.0 +0.2 +0.0 +0.6
carbon source D-Mannose 10 mg/mL (C) -0.0 -0.0 +0.2 +0.0 +0.6
remove
HMPREF1078_RS11910
plot		 remove
HMPREF1078_RS11915
plot		 remove
HMPREF1078_RS11920		 remove
HMPREF1078_RS11925
plot		 remove
HMPREF1078_RS11930
plot