Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS10680 and HMPREF1078_RS10685 are separated by 53 nucleotidesHMPREF1078_RS10685 and HMPREF1078_RS10690 are separated by 388 nucleotidesHMPREF1078_RS10690 and HMPREF1078_RS10695 are separated by 23 nucleotidesHMPREF1078_RS10695 and HMPREF1078_RS10700 are separated by 324 nucleotides HMPREF1078_RS10680: HMPREF1078_RS10680 - acyloxyacyl hydrolase, at 41,367 to 42,566 _RS10680 HMPREF1078_RS10685: HMPREF1078_RS10685 - tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB, at 42,620 to 43,942 _RS10685 HMPREF1078_RS10690: HMPREF1078_RS10690 - lysophospholipid acyltransferase family protein, at 44,331 to 45,239 _RS10690 HMPREF1078_RS10695: HMPREF1078_RS10695 - glycosyltransferase family 2 protein, at 45,263 to 46,327 _RS10695 HMPREF1078_RS10700: HMPREF1078_RS10700 - MarC family protein, at 46,652 to 47,296 _RS10700
Group Condition HMPREF1078_RS10680 HMPREF1078_RS10685 HMPREF1078_RS10690 HMPREF1078_RS10695 HMPREF1078_RS10700
carbon source complex media GAM 1 x (C) -0.3 -2.5 N.D. N.D. +0.2
carbon source complex media GAM 1 x (C) -0.3 -2.7 N.D. N.D. +0.7
carbon source NAG 10 mg/mL (C) +0.1 -0.7 N.D. N.D. -0.2
carbon source D-Galactose 10 mg/mL (C) -0.0 -0.4 N.D. N.D. -0.3
carbon source complex media RCM 1 x (C) -0.1 -0.4 N.D. N.D. -0.2
carbon source complex media Brucella 1 x (C) +0.0 -0.1 N.D. N.D. -0.4
carbon source NAG 10 mg/mL (C) +0.2 -0.4 N.D. N.D. -0.1
carbon source complex media LB 1 x (C) +0.1 +0.3 N.D. N.D. -0.5
carbon source Xylan from corncob 2.5 mg/mL (C) -0.2 +0.2 N.D. N.D. -0.2
carbon source D-Glucose 10 mg/mL (C) -0.1 +0.2 N.D. N.D. -0.1
carbon source complex media MRS 1 x (C) -0.2 +0.2 N.D. N.D. +0.2
carbon source D-Raffinose 10 mg/mL (C) -0.2 +0.1 N.D. N.D. +0.2
carbon source complex media ABB 1 x (C) +0.1 -0.2 N.D. N.D. +0.2
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.1 +0.2 N.D. N.D. +0.2
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.0 +0.4 N.D. N.D. -0.2
carbon source D-Xylose 10 mg/mL (C) +0.1 +0.5 N.D. N.D. -0.3
carbon source pectate 2.5 mg/mL (C) -0.1 +0.1 N.D. N.D. +0.4
carbon source complex media Brucella 1 x (C) -0.0 +0.1 N.D. N.D. +0.3
carbon source D-Glucose 10 mg/mL (C) -0.1 +0.6 N.D. N.D. -0.0
carbon source pectate 2.5 mg/mL (C) +0.2 +0.2 N.D. N.D. +0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.2 +0.5 N.D. N.D. -0.2
carbon source Sucrose 10 mg/mL (C) -0.1 +0.5 N.D. N.D. +0.1
carbon source Xylan from corncob 2.5 mg/mL (C) -0.1 +0.1 N.D. N.D. +0.6
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) -0.1 +0.3 N.D. N.D. +0.3
carbon source D-Xylose 10 mg/mL (C) -0.0 +0.5 N.D. N.D. +0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.3 -0.0 N.D. N.D. +0.4
carbon source complex media marine_broth_2216 1 x (C) +0.2 +0.1 N.D. N.D. +0.4
carbon source complex media MRS 1 x (C) -0.1 +0.6 N.D. N.D. +0.2
carbon source Lentilan from mushroom 2.5 mg/mL (C) -0.0 +0.6 N.D. N.D. +0.2
carbon source D-Maltose 10 mg/mL (C) -0.2 +1.0 N.D. N.D. +0.0
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