Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS09875 and HMPREF1078_RS09880 are separated by 118 nucleotidesHMPREF1078_RS09880 and HMPREF1078_RS09885 are separated by 76 nucleotidesHMPREF1078_RS09885 and HMPREF1078_RS09890 are separated by 85 nucleotidesHMPREF1078_RS09890 and HMPREF1078_RS09895 are separated by 182 nucleotides HMPREF1078_RS09875: HMPREF1078_RS09875 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 573,086 to 575,692 _RS09875 HMPREF1078_RS09880: HMPREF1078_RS09880 - class I mannose-6-phosphate isomerase, at 575,811 to 576,785 _RS09880 HMPREF1078_RS09885: HMPREF1078_RS09885 - alpha amylase C-terminal domain-containing protein, at 576,862 to 578,880 _RS09885 HMPREF1078_RS09890: HMPREF1078_RS09890 - cation:proton antiporter, at 578,966 to 581,281 _RS09890 HMPREF1078_RS09895: HMPREF1078_RS09895 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 581,464 to 583,527 _RS09895
Group Condition HMPREF1078_RS09875 HMPREF1078_RS09880 HMPREF1078_RS09885 HMPREF1078_RS09890 HMPREF1078_RS09895
carbon source D-Galactose 10 mg/mL (C) -0.0 N.D. -4.8 -0.0 +0.0
carbon source Beta-Lactose 10 mg/mL (C) +0.1 N.D. -4.9 -0.0 +0.0
carbon source Beta-Lactose 10 mg/mL (C) +0.0 N.D. -4.8 +0.1 -0.1
carbon source D-Mannose 10 mg/mL (C) +0.2 N.D. -4.4 -0.0 -0.1
carbon source complex media GAM 1 x (C) -0.1 N.D. -4.5 +0.1 +0.2
carbon source D-Galactose 10 mg/mL (C) -0.0 N.D. -4.4 -0.0 +0.2
carbon source D-Mannose 10 mg/mL (C) +0.2 N.D. -4.4 -0.0 +0.1
carbon source D-Glucose 10 mg/mL (C) -0.1 N.D. -4.2 +0.3 -0.0
carbon source complex media GAM 1 x (C) -0.0 N.D. -4.0 +0.1 -0.0
carbon source D-Glucose 10 mg/mL (C) -0.1 N.D. -3.6 +0.2 +0.3
carbon source NAG 10 mg/mL (C) +0.2 N.D. -3.4 +0.4 +0.2
carbon source NAG 10 mg/mL (C) +0.0 N.D. -2.9 +0.5 +0.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.1 N.D. -2.2 +0.1 +0.4
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.0 N.D. -1.1 -0.1 -0.2
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.2 N.D. -1.0 -0.2 -0.0
carbon source complex media LB 1 x (C) -0.4 N.D. -0.9 -0.1 +0.1
carbon source complex media MRS 1 x (C) +0.0 N.D. -1.0 +0.0 -0.2
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.2 N.D. -1.0 -0.1 +0.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.1 N.D. -1.9 +0.2 +0.5
carbon source complex media ABB 1 x (C) +0.2 N.D. -0.9 +0.1 -0.1
carbon source complex media LB 1 x (C) -0.2 N.D. -0.9 +0.1 +0.1
carbon source Sucrose 10 mg/mL (C) -0.1 N.D. -1.0 +0.6 -0.1
carbon source D-Maltose 10 mg/mL (C) -0.1 N.D. -2.0 +1.8 -0.2
carbon source D-Maltose 10 mg/mL (C) +0.1 N.D. -3.4 +3.2 +0.3
carbon source D-Raffinose 10 mg/mL (C) -0.1 N.D. -0.4 +0.7 +0.2
carbon source Xylan from corncob 2.5 mg/mL (C) +0.6 N.D. -2.9 +4.4 +0.0
carbon source D-Xylose 10 mg/mL (C) +0.6 N.D. -0.2 +2.1 +0.1
carbon source Xylan from corncob 2.5 mg/mL (C) +0.5 N.D. -2.1 +4.6 +0.5
carbon source D-Xylose 10 mg/mL (C) +0.4 N.D. -0.2 +4.1 -0.1
carbon source Sucrose 10 mg/mL (C) +0.1 N.D. -1.4 +5.2 +0.5
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