Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS09485 and HMPREF1078_RS09490 are separated by 5 nucleotidesHMPREF1078_RS09490 and HMPREF1078_RS09495 are separated by 40 nucleotidesHMPREF1078_RS09495 and HMPREF1078_RS09500 are separated by 458 nucleotidesHMPREF1078_RS09500 and HMPREF1078_RS09505 are separated by 240 nucleotides HMPREF1078_RS09485: HMPREF1078_RS09485 - DUF2461 domain-containing protein, at 481,641 to 482,312 _RS09485 HMPREF1078_RS09490: HMPREF1078_RS09490 - PD-(D/E)XK nuclease family protein, at 482,318 to 485,248 _RS09490 HMPREF1078_RS09495: HMPREF1078_RS09495 - L-glyceraldehyde 3-phosphate reductase, at 485,289 to 486,281 _RS09495 HMPREF1078_RS09500: HMPREF1078_RS09500 - NAD-dependent epimerase/dehydratase family protein, at 486,740 to 487,693 _RS09500 HMPREF1078_RS09505: HMPREF1078_RS09505 - glycine C-acetyltransferase, at 487,934 to 489,124 _RS09505
Group Condition HMPREF1078_RS09485 HMPREF1078_RS09490 HMPREF1078_RS09495 HMPREF1078_RS09500 HMPREF1078_RS09505
carbon source D-Mannose 10 mg/mL (C) +0.0 -2.7 -0.2 -0.5 -0.6
carbon source Beta-Lactose 10 mg/mL (C) +0.1 -2.7 -0.6 -0.3 -0.3
carbon source D-Mannose 10 mg/mL (C) +0.0 -2.5 -0.3 -0.3 -0.3
carbon source Beta-Lactose 10 mg/mL (C) +0.2 -2.6 -0.3 -0.2 -0.2
carbon source D-Galactose 10 mg/mL (C) +0.0 -2.4 -0.3 -0.2 -0.1
carbon source D-Glucose 10 mg/mL (C) -0.0 -2.3 +0.1 -0.2 -0.5
carbon source D-Galactose 10 mg/mL (C) +0.1 -2.3 -0.0 -0.2 -0.3
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.2 -2.0 -0.3 -0.2 +0.1
carbon source Sucrose 10 mg/mL (C) +0.1 -2.8 +0.0 +0.1 +0.1
carbon source D-Xylose 10 mg/mL (C) +0.0 -2.4 -0.1 +0.1 -0.0
carbon source complex media Brucella 1 x (C) -0.0 -2.2 +0.0 +0.1 -0.2
carbon source Lentilan from mushroom 2.5 mg/mL (C) +0.1 -2.4 -0.1 +0.0 +0.0
carbon source complex media marine_broth_2216 1 x (C) +0.1 -1.7 -0.5 -0.1 -0.1
carbon source complex media Yeast Extract 1 x (C) +0.1 -1.8 -0.0 -0.4 -0.1
carbon source D-Raffinose 10 mg/mL (C) +0.0 -2.7 -0.1 +0.3 +0.2
carbon source D-Xylose 10 mg/mL (C) -0.0 -2.1 -0.1 +0.1 +0.1
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.0 -1.9 -0.2 -0.1 +0.2
carbon source complex media BHI 1 x (C) +0.2 -1.8 +0.0 -0.1 -0.2
carbon source NAG 10 mg/mL (C) -0.1 -2.0 +0.0 +0.1 +0.1
carbon source complex media BHI 1 x (C) +0.2 -1.7 -0.1 -0.2 -0.0
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.2 -1.7 -0.2 +0.2 +0.1
carbon source NAG 10 mg/mL (C) +0.2 -2.1 -0.0 +0.2 +0.1
carbon source complex media RCM 1 x (C) +0.2 -1.6 -0.1 -0.2 +0.2
carbon source Xylan from corncob 2.5 mg/mL (C) +0.1 -1.8 -0.3 +0.2 +0.4
carbon source D-Raffinose 10 mg/mL (C) +0.1 -2.3 +0.1 +0.3 +0.4
carbon source Xylan from corncob 2.5 mg/mL (C) +0.0 -2.1 +0.0 +0.3 +0.4
carbon source complex media GAM 1 x (C) -0.0 -1.6 -0.0 +0.2 +0.3
carbon source complex media GAM 1 x (C) +0.1 -1.9 -0.0 +0.3 +0.4
carbon source complex media MRS 1 x (C) +0.1 -2.1 -0.0 +0.4 +0.7
carbon source complex media MRS 1 x (C) +0.0 -1.2 -0.3 +0.8 +1.1
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