Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS09430 and HMPREF1078_RS09435 are separated by 4 nucleotidesHMPREF1078_RS09435 and HMPREF1078_RS09440 are separated by 460 nucleotidesHMPREF1078_RS09440 and HMPREF1078_RS09445 are separated by 47 nucleotidesHMPREF1078_RS09445 and HMPREF1078_RS09450 are separated by 158 nucleotides HMPREF1078_RS09430: HMPREF1078_RS09430 - hypothetical protein, at 467,884 to 469,329 _RS09430 HMPREF1078_RS09435: HMPREF1078_RS09435 - serine protease, at 469,334 to 470,413 _RS09435 HMPREF1078_RS09440: HMPREF1078_RS09440 - DUF418 domain-containing protein, at 470,874 to 472,055 _RS09440 HMPREF1078_RS09445: HMPREF1078_RS09445 - peptide-methionine (R)-S-oxide reductase MsrB, at 472,103 to 473,083 _RS09445 HMPREF1078_RS09450: HMPREF1078_RS09450 - pyridoxamine kinase, at 473,242 to 474,102 _RS09450
Group Condition HMPREF1078_RS09430 HMPREF1078_RS09435 HMPREF1078_RS09440 HMPREF1078_RS09445 HMPREF1078_RS09450
carbon source D-Maltose 10 mg/mL (C) -2.0 -0.2 -0.1 -0.1 +0.3
carbon source D-Xylose 10 mg/mL (C) -1.8 +0.1 +0.1 -0.1 +0.0
carbon source Sucrose 10 mg/mL (C) -1.6 +0.2 -0.1 -0.1 -0.0
carbon source Lentilan from mushroom 2.5 mg/mL (C) -1.2 +0.0 +0.0 -0.1 -0.0
carbon source D-Raffinose 10 mg/mL (C) -1.0 -0.1 -0.1 -0.0 -0.1
carbon source D-Maltose 10 mg/mL (C) -0.4 -0.1 -0.3 +0.3 -0.6
carbon source Dextrin from potato starch 2.5 mg/mL (C) -1.0 +0.0 -0.1 +0.2 -0.2
carbon source D-Glucose 10 mg/mL (C) -0.5 -0.4 -0.0 +0.2 -0.2
carbon source Xylan from corncob 2.5 mg/mL (C) -0.9 +0.1 -0.0 +0.1 +0.0
carbon source Xylan from corncob 2.5 mg/mL (C) -1.0 +0.3 -0.1 -0.1 +0.2
carbon source complex media Yeast Extract 1 x (C) -0.6 +0.1 +0.0 -0.1 -0.2
carbon source Sucrose 10 mg/mL (C) -0.5 -0.1 -0.1 -0.1 +0.1
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.4 -0.1 +0.0 -0.1 -0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.3 -0.0 +0.1 -0.2 -0.1
carbon source Lentilan from mushroom 2.5 mg/mL (C) -1.0 +0.0 +0.0 +0.3 +0.1
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.7 -0.0 +0.2 +0.1 -0.2
carbon source NAG 10 mg/mL (C) -0.1 -0.2 -0.2 +0.1 -0.1
carbon source complex media MRS 1 x (C) -0.4 -0.1 +0.0 -0.1 +0.1
carbon source D-Raffinose 10 mg/mL (C) -0.6 +0.0 +0.0 +0.0 +0.1
carbon source complex media Yeast Extract 1 x (C) -0.5 +0.2 +0.0 -0.0 -0.1
carbon source pectate 2.5 mg/mL (C) -0.7 +0.1 +0.1 +0.1 +0.0
carbon source complex media MRS 1 x (C) -0.4 -0.1 +0.1 +0.0 +0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.3 -0.2 +0.0 +0.0 -0.4
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.4 -0.0 +0.1 -0.0 +0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.5 +0.1 -0.1 +0.0 +0.1
carbon source D-Xylose 10 mg/mL (C) -0.5 +0.2 -0.1 -0.0 +0.4
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.5 +0.1 +0.0 +0.0 +0.2
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.3 -0.1 +0.1 +0.1 +0.1
carbon source complex media GAM 1 x (C) +0.5 +0.2 -0.0 -0.0 -0.0
carbon source complex media Columbia 1 x (C) +0.2 -0.0 +0.2 +0.2 +0.2
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