Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS02605 and HMPREF1078_RS02610 are separated by 488 nucleotidesHMPREF1078_RS02610 and HMPREF1078_RS02615 are separated by 17 nucleotidesHMPREF1078_RS02615 and HMPREF1078_RS02620 are separated by 3 nucleotidesHMPREF1078_RS02620 and HMPREF1078_RS02625 are separated by 5 nucleotides HMPREF1078_RS02605: HMPREF1078_RS02605 - Arm DNA-binding domain-containing protein, at 649,044 to 649,352 _RS02605 HMPREF1078_RS02610: HMPREF1078_RS02610 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 649,841 to 651,001 _RS02610 HMPREF1078_RS02615: HMPREF1078_RS02615 - glycosyltransferase family 4 protein, at 651,019 to 652,209 _RS02615 HMPREF1078_RS02620: HMPREF1078_RS02620 - heparinase II/III family protein, at 652,213 to 653,766 _RS02620 HMPREF1078_RS02625: HMPREF1078_RS02625 - glycosyltransferase family 4 protein, at 653,772 to 654,827 _RS02625
Group Condition HMPREF1078_RS02605 HMPREF1078_RS02610 HMPREF1078_RS02615 HMPREF1078_RS02620 HMPREF1078_RS02625
carbon source NAG 10 mg/mL (C) -0.7 -0.2 -0.3 -0.0 -0.1
carbon source D-Xylose 10 mg/mL (C) -0.6 -0.5 -0.3 +0.2 -0.0
carbon source D-Maltose 10 mg/mL (C) -0.7 -0.5 -0.2 +0.1 +0.2
carbon source D-Glucose 10 mg/mL (C) -0.4 -0.1 -0.3 -0.2 +0.0
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.0 -0.3 -0.3 +0.3 -0.3
carbon source D-Galactose 10 mg/mL (C) -0.6 +0.0 -0.1 +0.1 -0.2
carbon source Xylan from corncob 2.5 mg/mL (C) -0.5 -0.1 -0.3 +0.0 +0.1
carbon source D-Mannose 10 mg/mL (C) -0.4 -0.1 -0.3 +0.1 -0.1
carbon source NAG 10 mg/mL (C) -0.4 -0.1 -0.1 -0.0 +0.0
carbon source D-Raffinose 10 mg/mL (C) -0.6 +0.1 +0.0 -0.0 -0.0
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.2 -0.2 +0.0 -0.2 +0.2
carbon source pectate 2.5 mg/mL (C) -0.3 -0.1 -0.1 +0.2 -0.2
carbon source D-Maltose 10 mg/mL (C) -0.5 -0.3 +0.2 +0.3 -0.0
carbon source D-Mannose 10 mg/mL (C) -0.1 -0.2 -0.2 +0.1 +0.1
carbon source D-Galactose 10 mg/mL (C) -0.2 -0.1 -0.1 +0.2 +0.0
carbon source D-Glucose 10 mg/mL (C) -0.2 +0.2 -0.3 -0.0 +0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.2 -0.1 +0.3 -0.2 -0.0
carbon source Xylan from corncob 2.5 mg/mL (C) -0.1 -0.2 -0.1 +0.2 +0.0
carbon source Sucrose 10 mg/mL (C) -0.0 +0.3 -0.1 -0.2 +0.1
carbon source complex media Columbia 1 x (C) -0.3 +0.1 +0.2 +0.2 +0.0
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.1 -0.3 +0.0 +0.3 +0.1
carbon source complex media marine_broth_2216 1 x (C) +0.2 -0.1 -0.2 +0.1 +0.2
carbon source D-Raffinose 10 mg/mL (C) -0.3 +0.2 +0.2 +0.3 -0.1
carbon source complex media GAM 1 x (C) +0.3 +0.1 -0.2 +0.2 +0.1
carbon source complex media marine_broth_2216 1 x (C) +0.4 +0.0 -0.1 +0.2 +0.2
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.5 +0.2 -0.1 +0.2 -0.1
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) +0.5 -0.0 -0.0 +0.2 +0.1
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.0 +0.4 +0.1 +0.6 +0.3
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.5 +0.2 +0.0 +0.5 +0.2
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) +0.6 +0.3 +0.3 +0.2 +0.5
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