Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS01630 and HMPREF1078_RS01635 are separated by 79 nucleotidesHMPREF1078_RS01635 and HMPREF1078_RS01640 are separated by 51 nucleotidesHMPREF1078_RS01640 and HMPREF1078_RS01645 are separated by 13 nucleotidesHMPREF1078_RS01645 and HMPREF1078_RS01650 are separated by 5 nucleotides HMPREF1078_RS01630: HMPREF1078_RS01630 - YjbH domain-containing protein, at 410,716 to 412,260 _RS01630 HMPREF1078_RS01635: HMPREF1078_RS01635 - TonB-dependent receptor, at 412,340 to 413,578 _RS01635 HMPREF1078_RS01640: HMPREF1078_RS01640 - polysaccharide biosynthesis/export family protein, at 413,630 to 414,397 _RS01640 HMPREF1078_RS01645: HMPREF1078_RS01645 - tyrosine-protein kinase, at 414,411 to 416,786 _RS01645 HMPREF1078_RS01650: HMPREF1078_RS01650 - hypothetical protein, at 416,792 to 417,514 _RS01650
Group Condition HMPREF1078_RS01630 HMPREF1078_RS01635 HMPREF1078_RS01640 HMPREF1078_RS01645 HMPREF1078_RS01650
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.0 +0.0 +0.2 -0.2 -0.5
carbon source complex media Yeast Extract 1 x (C) -0.2 -0.1 -0.2 +0.3 -0.2
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.2 +0.2 +0.2 +0.0 -0.4
carbon source D-Xylose 10 mg/mL (C) +0.9 -0.0 -0.2 -0.5 -0.1
carbon source Lentilan from mushroom 2.5 mg/mL (C) +0.1 +0.3 -0.2 -0.1 -0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.1 -0.3 +0.3 +0.3 -0.1
carbon source D-Xylose 10 mg/mL (C) +0.4 -0.2 +0.3 -0.3 -0.0
carbon source complex media MRS 1 x (C) +0.4 +0.0 -0.3 +0.0 +0.2
carbon source complex media LB 1 x (C) -0.4 +0.2 +0.0 +0.2 +0.3
carbon source complex media GAM 1 x (C) -0.1 +0.2 +0.1 -0.2 +0.2
carbon source Sucrose 10 mg/mL (C) +0.6 -0.1 +0.1 -0.0 -0.2
carbon source Xylan from corncob 2.5 mg/mL (C) +0.9 -0.2 +0.2 -0.1 -0.4
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.0 +0.3 -0.1 +0.1 +0.3
carbon source D-Maltose 10 mg/mL (C) +1.3 -0.5 +0.3 -0.2 -0.3
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.9 +0.0 +0.1 -0.2 -0.2
carbon source Xylan from corncob 2.5 mg/mL (C) +1.0 -0.1 +0.2 -0.2 -0.3
carbon source D-Maltose 10 mg/mL (C) +1.2 -0.4 +0.2 -0.2 -0.2
carbon source D-Glucose 10 mg/mL (C) +0.4 -0.2 +0.0 +0.3 +0.1
carbon source D-Raffinose 10 mg/mL (C) +0.7 -0.1 +0.1 +0.2 -0.1
carbon source pectate 2.5 mg/mL (C) +0.4 +0.3 -0.2 +0.2 +0.0
carbon source complex media Columbia 1 x (C) +0.4 +0.2 +0.2 +0.0 +0.1
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.4 +0.1 +0.1 +0.1 +0.3
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) +0.3 +0.2 +0.3 +0.3 +0.1
carbon source D-Raffinose 10 mg/mL (C) +0.8 -0.1 +0.3 +0.3 -0.1
carbon source NAG 10 mg/mL (C) +0.4 -0.1 +0.2 +0.3 +0.4
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.9 +0.2 +0.4 +0.1 -0.4
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.1 +0.3 +0.2 +0.6 +0.3
carbon source D-Galactose 10 mg/mL (C) +0.4 +0.2 +0.2 +0.2 +0.4
carbon source NAG 10 mg/mL (C) +0.7 +0.1 +0.4 +0.2 +0.2
carbon source Sucrose 10 mg/mL (C) +2.6 -0.0 +0.9 -0.2 -0.3
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