Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS01120 and HMPREF1078_RS01125 are separated by 102 nucleotidesHMPREF1078_RS01125 and HMPREF1078_RS01130 are separated by 87 nucleotidesHMPREF1078_RS01130 and HMPREF1078_RS01135 overlap by 26 nucleotidesHMPREF1078_RS01135 and HMPREF1078_RS01140 are separated by 385 nucleotides HMPREF1078_RS01120: HMPREF1078_RS01120 - prephenate dehydrogenase/arogenate dehydrogenase family protein, at 281,410 to 282,183 _RS01120 HMPREF1078_RS01125: HMPREF1078_RS01125 - bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type II, at 282,286 to 283,356 _RS01125 HMPREF1078_RS01130: HMPREF1078_RS01130 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 283,444 to 284,631 _RS01130 HMPREF1078_RS01135: HMPREF1078_RS01135 - prephenate dehydratase, at 284,606 to 285,451 _RS01135 HMPREF1078_RS01140: HMPREF1078_RS01140 - hydrogen peroxide-inducible genes activator, at 285,837 to 286,763 _RS01140
Group Condition HMPREF1078_RS01120 HMPREF1078_RS01125 HMPREF1078_RS01130 HMPREF1078_RS01135 HMPREF1078_RS01140
carbon source Sucrose 10 mg/mL (C) -6.8 -6.0 -5.9 -5.5 +0.1
carbon source Beta-Lactose 10 mg/mL (C) -6.0 -5.5 -5.9 -6.1 +0.0
carbon source Beta-Lactose 10 mg/mL (C) -6.4 -5.8 -6.2 -4.6 -0.1
carbon source D-Raffinose 10 mg/mL (C) -6.6 -5.8 -5.4 -5.1 +0.2
carbon source D-Xylose 10 mg/mL (C) -6.2 -5.8 -5.6 -5.0 +0.0
carbon source D-Galactose 10 mg/mL (C) -5.1 -5.6 -5.4 -5.8 -0.1
carbon source D-Galactose 10 mg/mL (C) -5.8 -5.7 -5.0 -5.1 +0.1
carbon source D-Raffinose 10 mg/mL (C) -6.3 -5.4 -5.3 -4.6 +0.2
carbon source D-Glucose 10 mg/mL (C) -5.6 -4.9 -5.0 -5.4 -0.1
carbon source D-Glucose 10 mg/mL (C) -6.0 -5.5 -5.2 -4.5 +0.2
carbon source NAG 10 mg/mL (C) -5.6 -4.6 -5.3 -5.7 +0.3
carbon source D-Mannose 10 mg/mL (C) -5.1 -5.2 -4.4 -6.1 +0.2
carbon source Sucrose 10 mg/mL (C) -5.5 -4.5 -4.8 -5.7 -0.1
carbon source Xylan from corncob 2.5 mg/mL (C) -5.2 -5.0 -5.1 -5.0 +0.1
carbon source NAG 10 mg/mL (C) -5.6 -4.6 -4.7 -5.2 +0.1
carbon source D-Mannose 10 mg/mL (C) -4.9 -5.5 -5.3 -4.1 -0.0
carbon source D-Maltose 10 mg/mL (C) -5.7 -4.8 -4.4 -4.0 +0.1
carbon source Xylan from corncob 2.5 mg/mL (C) -5.8 -4.8 -4.3 -3.7 +0.0
carbon source D-Xylose 10 mg/mL (C) -5.4 -4.6 -3.6 -3.1 +0.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) -2.5 -2.6 -1.8 -2.2 +0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) -2.6 -2.1 -1.3 -1.6 -0.4
carbon source D-Maltose 10 mg/mL (C) -2.2 -2.4 -1.7 -1.5 +0.3
carbon source .-Glucan from yeast 2.5 mg/mL (C) -1.5 -1.2 -1.4 -1.3 +0.0
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.7 -1.3 -1.1 -1.1 +0.5
carbon source pectate 2.5 mg/mL (C) -0.7 -0.9 -0.5 -0.3 -0.3
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.9 -0.8 -0.7 -0.6 +0.4
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.4 -0.7 -0.6 +0.1 -0.3
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.3 -0.7 -0.7 +0.1 -0.2
carbon source Lentilan from mushroom 2.5 mg/mL (C) -0.8 -0.7 -0.5 +0.7 +0.0
carbon source Lentilan from mushroom 2.5 mg/mL (C) -0.2 -0.3 -0.1 +0.6 -0.3
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