Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS00855 and HMPREF1078_RS00860 overlap by 14 nucleotidesHMPREF1078_RS00860 and HMPREF1078_RS00865 are separated by 273 nucleotidesHMPREF1078_RS00865 and HMPREF1078_RS00870 are separated by 117 nucleotidesHMPREF1078_RS00870 and HMPREF1078_RS00875 are separated by 62 nucleotides HMPREF1078_RS00855: HMPREF1078_RS00855 - Na+/H+ antiporter NhaA, at 203,482 to 204,846 _RS00855 HMPREF1078_RS00860: HMPREF1078_RS00860 - aldo/keto reductase, at 204,833 to 205,720 _RS00860 HMPREF1078_RS00865: HMPREF1078_RS00865 - MG2 domain-containing protein, at 205,994 to 211,525 _RS00865 HMPREF1078_RS00870: HMPREF1078_RS00870 - GAF domain-containing protein, at 211,643 to 212,116 _RS00870 HMPREF1078_RS00875: HMPREF1078_RS00875 - MATE family efflux transporter, at 212,179 to 213,525 _RS00875
Group Condition HMPREF1078_RS00855 HMPREF1078_RS00860 HMPREF1078_RS00865 HMPREF1078_RS00870 HMPREF1078_RS00875
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.4 -0.5 -0.4 -0.6 -0.2
carbon source complex media Yeast Extract 1 x (C) -0.0 -0.2 +0.1 -1.1 +0.1
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.6 -0.6 +0.1 -0.9 -0.1
carbon source pectate 2.5 mg/mL (C) -0.4 -0.1 -0.0 -0.5 +0.1
carbon source D-Mannose 10 mg/mL (C) +0.4 -0.4 +0.1 -1.1 +0.1
carbon source complex media BHI 1 x (C) -0.1 +0.1 +0.0 -0.9 +0.0
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.7 -0.1 +0.0 -1.7 +0.2
carbon source complex media LB 1 x (C) +0.1 -0.3 +0.1 -0.6 +0.1
carbon source D-Maltose 10 mg/mL (C) +0.2 +0.1 +0.0 -0.9 +0.0
carbon source D-Glucose 10 mg/mL (C) +0.3 -0.2 +0.1 -0.8 +0.0
carbon source complex media LB 1 x (C) +0.3 -0.2 -0.0 -0.7 +0.1
carbon source Lentilan from mushroom 2.5 mg/mL (C) +0.2 +0.1 -0.1 -0.7 +0.1
carbon source D-Raffinose 10 mg/mL (C) +0.1 -0.0 -0.2 -0.5 +0.1
carbon source D-Glucose 10 mg/mL (C) +0.4 -0.1 +0.4 -1.1 +0.0
carbon source Xylan from corncob 2.5 mg/mL (C) +0.4 +0.1 -0.0 -0.6 -0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.3 -0.4 +0.0 -0.3 +0.2
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) +0.4 -0.5 +0.2 -0.2 -0.1
carbon source complex media ABB 1 x (C) +0.3 -0.2 +0.1 -0.4 +0.0
carbon source pectate 2.5 mg/mL (C) +0.0 +0.2 +0.2 -0.7 +0.2
carbon source NAG 10 mg/mL (C) +0.2 +0.1 +0.1 -0.5 +0.1
carbon source NAG 10 mg/mL (C) +0.4 +0.0 +0.2 -0.5 +0.1
carbon source D-Mannose 10 mg/mL (C) +0.3 -0.1 +0.3 -0.2 -0.1
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) +0.2 +0.2 +0.1 -0.4 +0.1
carbon source complex media GAM 1 x (C) +0.6 -0.2 +0.1 -0.2 -0.1
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) -0.1 +0.5 +0.2 +0.1 -0.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.2 -0.3 +0.2 +0.3 +0.5
carbon source Beta-Lactose 10 mg/mL (C) +0.3 -0.3 +0.1 +0.4 +0.0
carbon source D-Galactose 10 mg/mL (C) +0.5 +0.0 +0.2 -0.2 +0.2
carbon source complex media GAM 1 x (C) +0.6 -0.1 +0.1 +0.2 -0.2
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.2 -0.4 +0.1 +0.8 +0.1
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