Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS00675 and HMPREF1078_RS00680 are separated by 120 nucleotidesHMPREF1078_RS00680 and HMPREF1078_RS00685 overlap by 10 nucleotidesHMPREF1078_RS00685 and HMPREF1078_RS00690 are separated by 80 nucleotidesHMPREF1078_RS00690 and HMPREF1078_RS00695 are separated by 36 nucleotides HMPREF1078_RS00675: HMPREF1078_RS00675 - SGNH/GDSL hydrolase family protein, at 157,386 to 159,137 _RS00675 HMPREF1078_RS00680: HMPREF1078_RS00680 - glycoside hydrolase family 97 protein, at 159,258 to 161,246 _RS00680 HMPREF1078_RS00685: HMPREF1078_RS00685 - MBL fold metallo-hydrolase, at 161,237 to 162,043 _RS00685 HMPREF1078_RS00690: HMPREF1078_RS00690 - tRNA-Cys, at 162,124 to 162,195 _RS00690 HMPREF1078_RS00695: HMPREF1078_RS00695 - tRNA-Cys, at 162,232 to 162,303 _RS00695
Group Condition HMPREF1078_RS00675 HMPREF1078_RS00680 HMPREF1078_RS00685 HMPREF1078_RS00690 HMPREF1078_RS00695
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) +0.1 +0.2 -0.1 -1.8 N.D.
carbon source D-Glucose 10 mg/mL (C) +0.2 -0.2 +0.0 -1.3 N.D.
carbon source D-Xylose 10 mg/mL (C) -0.1 -0.0 +0.1 -0.9 N.D.
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.0 -0.0 -0.1 -0.7 N.D.
carbon source D-Galactose 10 mg/mL (C) +0.1 -0.0 +0.1 -1.0 N.D.
carbon source D-Maltose 10 mg/mL (C) -0.4 -0.1 -0.2 -0.1 N.D.
carbon source D-Raffinose 10 mg/mL (C) -0.0 -0.6 +0.1 -0.3 N.D.
carbon source Xylan from corncob 2.5 mg/mL (C) -0.0 -0.3 +0.0 -0.4 N.D.
carbon source D-Maltose 10 mg/mL (C) +0.2 -0.1 -0.5 -0.3 N.D.
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.1 -0.1 -0.2 -0.4 N.D.
carbon source Beta-Lactose 10 mg/mL (C) +0.0 -0.0 -0.1 -0.6 N.D.
carbon source D-Raffinose 10 mg/mL (C) -0.0 -0.1 +0.1 -0.6 N.D.
carbon source D-Mannose 10 mg/mL (C) +0.2 -0.0 +0.1 -0.7 N.D.
carbon source NAG 10 mg/mL (C) +0.3 +0.1 +0.0 -0.9 N.D.
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.2 +0.2 -0.0 -0.4 N.D.
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.2 +0.1 -0.1 -0.5 N.D.
carbon source complex media MRS 1 x (C) -0.2 +0.0 +0.2 -0.4 N.D.
carbon source D-Galactose 10 mg/mL (C) +0.2 -0.0 +0.1 -0.6 N.D.
carbon source D-Mannose 10 mg/mL (C) +0.2 +0.0 +0.2 -0.4 N.D.
carbon source Sucrose 10 mg/mL (C) +0.0 +0.1 -0.6 +0.5 N.D.
carbon source complex media GAM 1 x (C) -0.3 -0.1 -0.0 +0.5 N.D.
carbon source complex media Yeast Extract 1 x (C) +0.2 +0.1 +0.2 -0.4 N.D.
carbon source complex media LB 1 x (C) -0.2 +0.1 -0.0 +0.5 N.D.
carbon source complex media GAM 1 x (C) -0.1 -0.1 +0.2 +0.3 N.D.
carbon source complex media MRS 1 x (C) -0.0 +0.1 -0.2 +0.4 N.D.
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.1 -0.1 +0.1 +0.4 N.D.
carbon source complex media marine_broth_2216 1 x (C) -0.2 -0.0 +0.2 +0.7 N.D.
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.1 +0.3 +0.0 +0.5 N.D.
carbon source complex media Brucella 1 x (C) +0.1 -0.0 +0.1 +0.7 N.D.
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.1 +0.0 +0.3 +0.6 N.D.
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