Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS00665 and HMPREF1078_RS00670 are separated by 0 nucleotidesHMPREF1078_RS00670 and HMPREF1078_RS00675 are separated by 247 nucleotidesHMPREF1078_RS00675 and HMPREF1078_RS00680 are separated by 120 nucleotidesHMPREF1078_RS00680 and HMPREF1078_RS00685 overlap by 10 nucleotides HMPREF1078_RS00665: HMPREF1078_RS00665 - UDP-N-acetylmuramate dehydrogenase, at 155,339 to 156,352 _RS00665 HMPREF1078_RS00670: HMPREF1078_RS00670 - MBL fold metallo-hydrolase, at 156,353 to 157,138 _RS00670 HMPREF1078_RS00675: HMPREF1078_RS00675 - SGNH/GDSL hydrolase family protein, at 157,386 to 159,137 _RS00675 HMPREF1078_RS00680: HMPREF1078_RS00680 - glycoside hydrolase family 97 protein, at 159,258 to 161,246 _RS00680 HMPREF1078_RS00685: HMPREF1078_RS00685 - MBL fold metallo-hydrolase, at 161,237 to 162,043 _RS00685
Group Condition HMPREF1078_RS00665 HMPREF1078_RS00670 HMPREF1078_RS00675 HMPREF1078_RS00680 HMPREF1078_RS00685
carbon source D-Maltose 10 mg/mL (C) N.D. -0.8 -0.4 -0.1 -0.2
carbon source D-Maltose 10 mg/mL (C) N.D. -0.6 +0.2 -0.1 -0.5
carbon source D-Xylose 10 mg/mL (C) N.D. -0.8 +0.0 -0.1 -0.2
carbon source D-Raffinose 10 mg/mL (C) N.D. -0.4 -0.0 -0.6 +0.1
carbon source Sucrose 10 mg/mL (C) N.D. -0.4 +0.0 +0.1 -0.6
carbon source Xylan from corncob 2.5 mg/mL (C) N.D. -0.2 -0.1 +0.0 -0.4
carbon source complex media GAM 1 x (C) N.D. -0.1 -0.3 -0.1 -0.0
carbon source Xylan from corncob 2.5 mg/mL (C) N.D. -0.2 -0.0 -0.3 +0.0
carbon source Dextrin from potato starch 2.5 mg/mL (C) N.D. -0.3 -0.2 +0.2 -0.0
carbon source Lentilan from mushroom 2.5 mg/mL (C) N.D. -0.2 +0.1 +0.1 -0.3
carbon source D-Glucose 10 mg/mL (C) N.D. -0.3 +0.2 -0.2 +0.0
carbon source NAG 10 mg/mL (C) N.D. -0.4 +0.1 +0.1 -0.1
carbon source complex media GAM 1 x (C) N.D. -0.2 -0.1 -0.1 +0.2
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) N.D. +0.1 -0.4 -0.0 +0.1
carbon source complex media marine_broth_2216 1 x (C) N.D. -0.1 -0.2 -0.0 +0.2
carbon source .-Glucan from yeast 2.5 mg/mL (C) N.D. +0.2 -0.3 -0.1 +0.1
carbon source complex media MRS 1 x (C) N.D. -0.1 -0.2 +0.0 +0.2
carbon source D-Galactose 10 mg/mL (C) N.D. -0.4 +0.2 -0.0 +0.1
carbon source pectate 2.5 mg/mL (C) N.D. +0.1 -0.2 -0.1 +0.2
carbon source complex media marine_broth_2216 1 x (C) N.D. +0.3 -0.4 +0.0 +0.1
carbon source D-Glucose 10 mg/mL (C) N.D. -0.2 +0.2 -0.0 +0.2
carbon source complex media LB 1 x (C) N.D. +0.1 -0.2 +0.0 +0.2
carbon source D-Mannose 10 mg/mL (C) N.D. -0.1 +0.2 +0.0 +0.2
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) N.D. +0.1 -0.1 +0.3 +0.0
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) N.D. +0.2 -0.1 +0.1 +0.1
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) N.D. +0.3 +0.1 +0.2 -0.1
carbon source .-Glucan from yeast 2.5 mg/mL (C) N.D. +0.6 +0.1 -0.1 -0.1
carbon source complex media Columbia 1 x (C) N.D. +0.2 +0.2 +0.0 +0.1
carbon source complex media Yeast Extract 1 x (C) N.D. +0.1 +0.2 +0.1 +0.2
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) N.D. +0.4 +0.1 +0.0 +0.3
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