Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS00540 and HMPREF1078_RS00545 are separated by 4 nucleotidesHMPREF1078_RS00545 and HMPREF1078_RS00550 are separated by 108 nucleotidesHMPREF1078_RS00550 and HMPREF1078_RS00555 overlap by 4 nucleotidesHMPREF1078_RS00555 and HMPREF1078_RS00560 are separated by 17 nucleotides HMPREF1078_RS00540: HMPREF1078_RS00540 - hypothetical protein, at 122,489 to 123,106 _RS00540 HMPREF1078_RS00545: HMPREF1078_RS00545 - metallophosphoesterase, at 123,111 to 123,917 _RS00545 HMPREF1078_RS00550: HMPREF1078_RS00550 - phosphatase PAP2 family protein, at 124,026 to 124,961 _RS00550 HMPREF1078_RS00555: HMPREF1078_RS00555 - CDP-alcohol phosphatidyltransferase family protein, at 124,958 to 125,641 _RS00555 HMPREF1078_RS00560: HMPREF1078_RS00560 - GtrA family protein, at 125,659 to 126,165 _RS00560
Group Condition HMPREF1078_RS00540 HMPREF1078_RS00545 HMPREF1078_RS00550 HMPREF1078_RS00555 HMPREF1078_RS00560
carbon source complex media MRS 1 x (C) +0.1 -0.3 -3.9 -4.8 -1.0
carbon source complex media MRS 1 x (C) -0.0 -0.2 -4.2 -3.8 -1.3
carbon source Xylan from corncob 2.5 mg/mL (C) -0.1 +0.1 +0.4 -1.9 -0.9
carbon source complex media GAM 1 x (C) +0.1 -0.2 +0.1 -0.6 -0.7
carbon source complex media GAM 1 x (C) +0.0 +0.0 -0.0 -0.9 -0.5
carbon source complex media marine_broth_2216 1 x (C) +0.0 -0.2 -0.1 -0.7 -0.3
carbon source Sucrose 10 mg/mL (C) -0.0 -0.1 +0.1 -0.7 -0.6
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.2 -0.3 +0.2 -1.2 -0.1
carbon source complex media marine_broth_2216 1 x (C) +0.1 -0.0 -0.2 -0.6 -0.4
carbon source D-Raffinose 10 mg/mL (C) +0.1 +0.1 +0.3 -1.2 -0.5
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.0 -0.3 +0.1 -0.3 -0.5
carbon source D-Maltose 10 mg/mL (C) +0.4 +0.3 +0.9 -1.7 -0.9
carbon source D-Raffinose 10 mg/mL (C) +0.2 +0.2 +0.6 -0.9 -1.0
carbon source Xylan from corncob 2.5 mg/mL (C) +0.1 -0.0 +0.5 -1.0 -0.4
carbon source D-Galactose 10 mg/mL (C) +0.3 -0.0 +0.3 -0.6 -0.6
carbon source D-Xylose 10 mg/mL (C) -0.0 +0.2 +0.3 -0.7 -0.4
carbon source Lentilan from mushroom 2.5 mg/mL (C) +0.2 +0.1 +0.1 -0.8 -0.1
carbon source D-Mannose 10 mg/mL (C) +0.1 -0.0 +0.3 -0.4 -0.4
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.2 +0.0 +0.3 -0.6 -0.3
carbon source Beta-Lactose 10 mg/mL (C) +0.2 +0.2 +0.2 -0.3 -0.6
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.3 +0.0 +0.2 -0.8 +0.1
carbon source D-Galactose 10 mg/mL (C) +0.2 +0.2 +0.4 -0.2 -0.4
carbon source Sucrose 10 mg/mL (C) +0.2 +0.1 +1.9 -0.9 -1.0
carbon source Lentilan from mushroom 2.5 mg/mL (C) +0.3 -0.2 +0.3 -0.3 +0.2
carbon source D-Maltose 10 mg/mL (C) +0.2 +0.2 +1.1 -0.8 -0.4
carbon source D-Xylose 10 mg/mL (C) +0.3 +0.2 +0.6 -0.5 -0.3
carbon source NAG 10 mg/mL (C) +0.2 +0.2 +0.4 -0.2 -0.3
carbon source D-Glucose 10 mg/mL (C) +0.3 +0.1 +0.2 +0.3 -0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.1 +0.3 +0.5 +0.3 +0.3
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) +0.5 +0.4 +0.5 +0.3 +0.1
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