Fitness for 5 genes in Parabacteroides merdae CL09T00C40

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500 ntHMPREF1078_RS00300 and HMPREF1078_RS00305 are separated by 477 nucleotidesHMPREF1078_RS00305 and HMPREF1078_RS00310 are separated by 44 nucleotidesHMPREF1078_RS00310 and HMPREF1078_RS00315 are separated by 294 nucleotidesHMPREF1078_RS00315 and HMPREF1078_RS00320 are separated by 84 nucleotides HMPREF1078_RS00300: HMPREF1078_RS00300 - 50S ribosomal protein L20, at 63,905 to 64,249 _RS00300 HMPREF1078_RS00305: HMPREF1078_RS00305 - family 20 glycosylhydrolase, at 64,727 to 66,901 _RS00305 HMPREF1078_RS00310: HMPREF1078_RS00310 - GH92 family glycosyl hydrolase, at 66,946 to 69,189 _RS00310 HMPREF1078_RS00315: HMPREF1078_RS00315 - aspartate--tRNA ligase, at 69,484 to 71,241 _RS00315 HMPREF1078_RS00320: HMPREF1078_RS00320 - Nif3-like dinuclear metal center hexameric protein, at 71,326 to 72,423 _RS00320
Group Condition HMPREF1078_RS00300 HMPREF1078_RS00305 HMPREF1078_RS00310 HMPREF1078_RS00315 HMPREF1078_RS00320
carbon source complex media GAM 1 x (C) N.D. -0.2 -0.2 N.D. -0.2
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) N.D. -0.0 +0.1 N.D. -0.6
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) N.D. +0.1 -0.0 N.D. -0.6
carbon source complex media Yeast Extract 1 x (C) N.D. -0.0 +0.0 N.D. -0.5
carbon source complex media marine_broth_2216 1 x (C) N.D. -0.2 -0.0 N.D. -0.2
carbon source NAG 10 mg/mL (C) N.D. +0.1 +0.1 N.D. -0.6
carbon source complex media GAM 1 x (C) N.D. -0.2 -0.1 N.D. -0.1
carbon source complex media marine_broth_2216 1 x (C) N.D. -0.0 -0.2 N.D. -0.1
carbon source D-Maltose 10 mg/mL (C) N.D. +0.0 +0.3 N.D. -0.6
carbon source D-Glucose 10 mg/mL (C) N.D. -0.0 +0.1 N.D. -0.4
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) N.D. +0.0 +0.1 N.D. -0.4
carbon source complex media LB 1 x (C) N.D. -0.1 +0.1 N.D. -0.2
carbon source complex media MRS 1 x (C) N.D. +0.1 +0.1 N.D. -0.3
carbon source NAG 10 mg/mL (C) N.D. -0.0 +0.2 N.D. -0.2
carbon source Sucrose 10 mg/mL (C) N.D. -0.0 +0.4 N.D. -0.3
carbon source D-Mannose 10 mg/mL (C) N.D. +0.1 +0.2 N.D. -0.2
carbon source D-Galactose 10 mg/mL (C) N.D. +0.0 +0.3 N.D. -0.1
carbon source Xylan from corncob 2.5 mg/mL (C) N.D. +0.1 +0.3 N.D. -0.2
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) N.D. +0.3 +0.4 N.D. -0.3
carbon source Xylan from corncob 2.5 mg/mL (C) N.D. -0.0 +0.3 N.D. +0.1
carbon source D-Maltose 10 mg/mL (C) N.D. +0.1 +0.5 N.D. -0.3
carbon source D-Xylose 10 mg/mL (C) N.D. +0.0 +0.2 N.D. +0.2
carbon source .-Glucan from yeast 2.5 mg/mL (C) N.D. +0.2 +0.4 N.D. -0.2
carbon source .-Glucan from yeast 2.5 mg/mL (C) N.D. +0.2 +0.3 N.D. -0.1
carbon source complex media BHI 1 x (C) N.D. +0.1 +0.2 N.D. +0.2
carbon source Dextrin from potato starch 2.5 mg/mL (C) N.D. -0.0 +0.3 N.D. +0.3
carbon source Lentilan from mushroom 2.5 mg/mL (C) N.D. +0.1 +0.2 N.D. +0.3
carbon source D-Xylose 10 mg/mL (C) N.D. -0.0 +0.5 N.D. +0.2
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) N.D. +0.2 +0.4 N.D. +0.1
carbon source Dextrin from potato starch 2.5 mg/mL (C) N.D. -0.1 +0.5 N.D. +0.5
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