Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HMPREF1058_RS01450	HMPREF1058_RS01445	HMPREF1058_RS21720	HMPREF1058_RS0120085	HMPREF1058_RS01435
carbon source	D-Glucose 5 mg/ml (C)	-4.6	-0.1	+0.1	N.D.	+0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day7	-4.7	+0.7	-0.3	N.D.	+0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6	-4.8	+0.8	-0.3	N.D.	+0.4
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1	-2.9	-0.8	-0.8	N.D.	+0.8
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day6	-4.1	+0.6	-0.2	N.D.	+0.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	-3.7	+0.6	-0.3	N.D.	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day5	-3.9	+0.7	-0.1	N.D.	+0.4
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day6	-4.3	+1.3	+0.1	N.D.	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6	-3.5	+0.9	-0.2	N.D.	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day4	-3.2	+0.2	+0.3	N.D.	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day7	-3.1	+1.1	-0.7	N.D.	+0.7
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day5	-3.0	+0.9	-0.3	N.D.	+0.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7	-3.3	+1.1	-0.1	N.D.	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9	-2.9	+1.0	-0.2	N.D.	+0.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day6	-3.0	+0.9	-0.2	N.D.	+0.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9	-3.7	+1.5	-0.1	N.D.	+0.7
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day5	-3.3	+1.0	+0.1	N.D.	+0.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14	-4.1	+1.4	+0.8	N.D.	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9	-2.1	+1.0	-1.1	N.D.	+0.6
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7	-3.1	+1.4	-0.2	N.D.	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day5	-3.1	+1.3	-0.0	N.D.	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day7	-3.1	+0.8	+0.5	N.D.	+0.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9	-3.4	+1.6	+0.3	N.D.	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9	-3.7	+1.7	+0.2	N.D.	+0.7
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day7	-2.3	+1.0	-0.2	N.D.	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day6	-3.2	+1.0	+0.9	N.D.	+0.7
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	-2.5	+1.4	+0.4	N.D.	+0.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day7	-2.2	+1.2	+1.2	N.D.	+0.6
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day9	-2.3	+1.5	+1.5	N.D.	+0.6
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	+0.1	+4.1	-0.5	N.D.	+0.3