Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 297 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1058_RS11465 and HMPREF1058_RS11460 are separated by 116 nucleotidesHMPREF1058_RS11460 and HMPREF1058_RS20690 are separated by 218 nucleotidesHMPREF1058_RS20690 and HMPREF1058_RS11455 are separated by 165 nucleotidesHMPREF1058_RS11455 and HMPREF1058_RS11450 are separated by 134 nucleotides HMPREF1058_RS11465: HMPREF1058_RS11465 - hypothetical protein, at 372,167 to 372,412 _RS11465 HMPREF1058_RS11460: HMPREF1058_RS11460 - hypothetical protein, at 372,529 to 374,187 _RS11460 HMPREF1058_RS20690: HMPREF1058_RS20690 - AAA family ATPase, at 374,406 to 374,588 _RS20690 HMPREF1058_RS11455: HMPREF1058_RS11455 - PorT family protein, at 374,754 to 375,443 _RS11455 HMPREF1058_RS11450: HMPREF1058_RS11450 - hypothetical protein, at 375,578 to 377,245 _RS11450
Group Condition HMPREF1058_RS11465 HMPREF1058_RS11460 HMPREF1058_RS20690 HMPREF1058_RS11455 HMPREF1058_RS11450
carbon source Dextran 5 mg/ml (C) -0.5 -0.1 -1.8 -0.6 -0.2
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.7 -0.0 -0.4 -0.9 -0.3
carbon source D-Galactose (C) -0.7 -0.2 -0.1 -0.4 -0.8
carbon source Polygalacturonic 5 mg/ml (C) -0.3 -0.2 -0.8 -0.7 -0.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day6 -0.4 -0.2 -0.8 -0.1 -0.2
carbon source (+)-Arabinogalactan 5 mg/ml (C) -0.1 -0.1 -0.9 -0.4 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day2 -0.1 -0.2 -0.9 -0.3 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day7 -0.2 -0.3 -1.0 -0.0 -0.1
carbon source (+)-Arabinogalactan 5 mg/ml (C) -0.8 -0.2 -0.4 -0.2 -0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9 -0.2 -0.2 -0.6 +0.1 -0.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day6 -0.3 -0.1 -0.9 +0.2 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day1 -0.1 -0.2 -1.1 -0.3 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6 +0.0 -0.2 -0.8 +0.1 -0.6
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 -0.3 -0.3 -0.5 -0.3 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1 -0.7 -0.2 -0.5 -0.0 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -0.1 -0.3 -1.0 +0.4 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day7 +0.1 -0.2 -0.6 +0.3 -0.6
carbon source a-Cyclodextrin (C) +0.3 +0.0 -0.5 -0.4 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 +0.2 -0.2 -0.6 +0.3 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6 +0.1 -0.3 -0.5 +0.4 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 +0.1 -0.2 -0.6 +0.5 -0.2
carbon source Sucrose 20 mM (C) +0.4 +0.0 -0.9 -0.1 +0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.1 -0.4 -0.7 +0.7 -0.0
carbon source Dextran 5 mg/ml (C) +0.5 -0.0 -0.5 -0.3 +0.2
carbon source Pectin from citrus peel (C) -0.4 -0.1 +0.3 +0.0 +0.9
carbon source D-Glucose (C) +0.3 -0.0 +0.9 -0.3 +0.0
carbon source NAG 2.5 mg/ml (C) +0.2 -0.1 -0.4 +0.5 +0.9
carbon source D-Galacturonic Acid 20 mM (C) -0.1 -0.1 +0.0 +0.9 +1.3
carbon source NAG 2.5 mg/ml (C) +0.1 +0.1 +0.3 +0.5 +1.0
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.6 +0.1 +1.2 +0.1 +0.2
remove
HMPREF1058_RS11465
plot		 remove
HMPREF1058_RS11460
plot		 remove
HMPREF1058_RS20690		 remove
HMPREF1058_RS11455
plot		 remove
HMPREF1058_RS11450
plot