Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 297 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1058_RS18425 and HMPREF1058_RS18420 are separated by 7 nucleotidesHMPREF1058_RS18420 and HMPREF1058_RS18415 are separated by 42 nucleotidesHMPREF1058_RS18415 and HMPREF1058_RS18410 are separated by 17 nucleotidesHMPREF1058_RS18410 and HMPREF1058_RS18405 are separated by 9 nucleotides HMPREF1058_RS18425: HMPREF1058_RS18425 - ABC-F family ATP-binding cassette domain-containing protein, at 159,988 to 161,853 _RS18425 HMPREF1058_RS18420: HMPREF1058_RS18420 - DUF3805 domain-containing protein, at 161,861 to 162,694 _RS18420 HMPREF1058_RS18415: HMPREF1058_RS18415 - VOC family protein, at 162,737 to 163,114 _RS18415 HMPREF1058_RS18410: HMPREF1058_RS18410 - MBL fold metallo-hydrolase, at 163,132 to 163,923 _RS18410 HMPREF1058_RS18405: HMPREF1058_RS18405 - hypothetical protein, at 163,933 to 165,123 _RS18405
Group Condition HMPREF1058_RS18425 HMPREF1058_RS18420 HMPREF1058_RS18415 HMPREF1058_RS18410 HMPREF1058_RS18405
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day7 -0.5 -1.2 -0.4 -0.9 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9 -0.7 -0.8 -0.7 -1.0 +0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -0.8 -1.6 +0.2 -0.7 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.5 -1.1 -0.4 -0.7 +0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.7 -1.7 +0.4 -0.7 +0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -0.3 -0.4 -0.9 -0.2 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -0.4 -0.5 -0.6 -1.0 +0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.7 -1.3 +0.3 -0.9 +0.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 +0.4 -0.6 -0.8 -1.0 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 -0.5 -1.2 +0.3 -0.6 +0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -0.3 -1.2 +0.1 -0.6 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day5 -0.2 -0.9 -0.3 -0.6 +0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 -0.4 -1.8 +0.7 -0.6 +0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.6 -0.9 +0.2 -0.7 +0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6 -0.5 -1.1 +0.2 -0.5 +0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -0.5 -1.2 +0.2 -0.5 +0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -0.5 -0.9 +0.1 -0.5 +0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day2 +0.1 +0.5 -1.0 -0.3 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 -0.5 -1.6 +1.1 -1.0 +0.9
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 -0.1 -0.9 +0.1 -0.7 +0.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day7 -0.6 -0.8 +0.7 -0.5 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day4 -0.3 -0.7 +0.4 -0.5 +0.4
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +0.3 +0.5 +1.3 -0.0 +0.2
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.3 +0.3 +1.0 +0.4 +0.7
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.5 +0.4 +0.7 +0.6 +0.5
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.0 +0.1 +0.4 +0.3 +1.0
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.5 +0.7 +0.4 +0.3 +1.0
carbon source D-Glucose 5 mg/ml (C) +0.4 +0.6 +0.9 +0.3 +1.0
carbon source D-Glucose 5 mg/ml (C) +0.5 +0.5 +0.8 +0.5 +0.8
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.5 +0.7 +0.1 +1.0 +0.6
remove
HMPREF1058_RS18425
plot		 remove
HMPREF1058_RS18420
plot		 remove
HMPREF1058_RS18415		 remove
HMPREF1058_RS18410
plot		 remove
HMPREF1058_RS18405
plot