Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HMPREF1058_RS18050	HMPREF1058_RS18045	HMPREF1058_RS18040	HMPREF1058_RS18035	HMPREF1058_RS18030
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14	-3.4	-2.8	-3.8	+0.0	-0.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8	-2.3	-1.5	-1.8	+0.1	+0.1
carbon source	D-Galactose 20 mM (C)	-4.9	-0.1	-0.1	-0.3	+0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	-1.7	-1.5	-1.8	+0.1	-0.2
carbon source	Dextran 5 mg/ml (C)	-4.5	+0.4	-0.2	-0.2	-0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7	-1.9	-1.2	-1.3	+0.0	-0.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day6	-2.3	-0.6	-1.2	-0.3	+0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	-1.1	-1.4	-1.6	+0.2	-0.2
carbon source	Sucrose 20 mM (C)	-1.5	+0.3	-0.4	-3.0	+0.6
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7	-1.5	-1.2	-1.3	-0.1	+0.2
carbon source	D-Mannose 20 mM (C)	+0.1	+0.1	-0.3	-3.5	-0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2	-2.9	-0.3	-0.4	+0.1	-0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6	-1.9	-0.5	-1.3	+0.3	-0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6	-1.8	-0.8	-1.4	+0.2	+0.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5	-1.1	-1.1	-1.3	-0.1	+0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6	-1.1	-0.9	-1.1	-0.1	-0.2
carbon source	D-Mannose 20 mM (C)	+0.8	+0.2	-0.4	-3.8	+0.0
carbon source	D-Glucose 20 mM (C)	-0.9	+0.2	+0.1	-2.8	+0.2
carbon source	D-Mannose (C)	-0.5	-0.2	+0.3	-2.8	+0.0
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7	-1.2	-0.8	-1.2	+0.2	-0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6	-1.7	-0.5	-0.9	+0.2	-0.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day9	-0.9	-0.5	-1.6	+0.3	-0.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse3; day1	-2.6	-0.4	-0.2	+0.2	+0.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3	-1.7	-0.6	-0.8	+0.5	-0.0
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4	-1.5	-0.5	-0.8	+0.5	-0.1
carbon source	D-Glucose 20 mM (C)	+0.6	+0.1	-0.2	-3.0	-0.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day1	-1.9	-0.5	-0.5	+0.3	+0.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4	+0.8	-1.1	-1.2	+0.2	+0.0
carbon source	Sucrose 20 mM (C)	+1.1	+0.3	-0.1	-2.7	+0.4
carbon source	D-Glucose (C)	+1.3	-0.3	-0.1	+0.4	+1.6