Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HMPREF1058_RS17025	HMPREF1058_RS17020	HMPREF1058_RS17015	HMPREF1058_RS17010	HMPREF1058_RS17005
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8	-2.8	-0.9	-0.8	-1.0	-0.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7	-2.1	-0.7	-0.9	-1.0	-0.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6	-2.0	-0.8	-0.5	-1.1	-0.0
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6	-2.0	-0.9	-0.5	-0.5	+0.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7	-2.3	-0.9	-0.5	-0.3	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5	-1.7	-0.6	-0.4	-0.7	+0.3
carbon source	Polygalacturonic 5 mg/ml (C)	-1.8	-0.2	-0.6	-0.2	-0.1
carbon source	Pectin from citrus peel (C)	-1.5	-0.4	-0.3	-0.0	-0.6
carbon source	Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C)	-0.5	-0.1	-0.1	-0.4	-1.8
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day2	-1.0	-0.5	-0.4	-0.7	-0.3
carbon source	D-Maltose 20 mM (C)	-1.8	-0.3	-0.8	-0.2	+0.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14	-4.2	-0.2	+1.3	-0.1	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4	-1.5	-0.7	-0.2	-0.5	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6	-1.8	-0.6	-0.3	-0.4	+0.8
carbon source	D-Mannose 20 mM (C)	-2.3	-0.3	+0.0	-0.2	+0.5
carbon source	D-Mannose 20 mM (C)	-1.9	-0.2	-0.4	-0.2	+0.4
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3	-1.1	-0.8	-0.2	-0.9	+0.7
carbon source	D-Galactose 20 mM (C)	-1.6	-0.2	+0.2	+0.2	-0.7
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3	-1.6	-0.6	+0.1	-0.3	+0.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day9	-0.9	-0.8	-0.4	-0.2	+0.6
carbon source	(+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)	-1.4	+0.1	-0.7	-0.1	+0.5
carbon source	D-Mannose 20 mM (C)	-1.8	-0.2	+0.1	-0.2	+0.5
carbon source	D-Mannose 20 mM (C)	-1.7	-0.2	-0.2	-0.0	+0.7
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5	-1.3	-0.9	-0.0	-0.2	+1.0
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6	-1.0	-0.7	-0.1	-0.5	+0.9
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5	-1.6	-0.3	+0.2	-0.5	+0.9
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	-1.7	-0.1	+1.3	+0.1	+0.7
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	-1.9	-0.1	+1.4	+0.0	+0.9
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9	-1.0	-0.5	+1.3	+0.2	+0.8
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7	-0.2	-0.4	+1.3	+0.1	+0.9