Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Top 30 experiments (either direction), sorted by average fitness

Or view all 297 experiments or choose conditions or try the comparative fitness browser

Group	Condition	HMPREF1058_RS16455	HMPREF1058_RS0119355	HMPREF1058_RS16450	HMPREF1058_RS16445	HMPREF1058_RS16440
carbon source	Arabinan from sugar beet 5mg/ml (C)	-0.5	-0.5	+0.1	N.D.	-2.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1	-0.6	-0.4	-0.1	N.D.	-2.1
carbon source	Arabinan from sugar beet 5mg/ml (C)	+0.0	-0.7	-0.0	N.D.	-2.5
carbon source	beta-Cyclodextrin 5 mg/ml (C)	-0.5	-0.6	-0.1	N.D.	-1.7
carbon source	Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)	-0.5	-0.5	-0.1	N.D.	-1.9
carbon source	Mannan from Saccharomyces cerevisiae 5 mg/ml (C)	-0.2	-0.3	-0.2	N.D.	-2.1
carbon source	Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)	-0.2	-0.6	-0.0	N.D.	-1.9
carbon source	Mannan from Saccharomyces cerevisiae 5 mg/ml (C)	-0.2	-0.6	+0.2	N.D.	-2.0
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2	+0.1	-0.7	-0.4	N.D.	-1.7
carbon source	D-Glucose 5 mg/ml (C)	-0.0	-0.5	-0.1	N.D.	-2.0
carbon source	D-Glucose 5 mg/ml (C)	+0.1	-0.4	-0.1	N.D.	-2.1
carbon source	Polygalacturonic 5 mg/ml (C)	-0.4	-0.5	+0.0	N.D.	-1.8
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2	-0.2	-0.1	+0.3	N.D.	-2.6
carbon source	Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C)	-0.2	-0.4	-0.1	N.D.	-1.7
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day2	+0.2	-0.2	+0.1	N.D.	-2.4
carbon source	D-Glucose-6-Phosphate 20 mM (C)	-0.0	+0.0	+0.2	N.D.	-2.5
carbon source	D-Xylose 20 mM (C)	-0.1	-0.0	+0.2	N.D.	-2.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3	+0.0	+0.4	-0.6	N.D.	-1.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day1	+0.7	+0.1	-0.1	N.D.	-2.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day2	-0.5	+0.5	-0.1	N.D.	-1.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5	+0.4	+0.2	-0.2	N.D.	-1.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4	+0.4	+0.5	-0.1	N.D.	-1.9
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day2	+0.5	+0.2	-0.3	N.D.	-1.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6	+0.8	+0.2	-0.2	N.D.	-1.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	+0.9	+0.3	-0.5	N.D.	-1.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7	+0.6	+0.5	+0.1	N.D.	-1.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6	+0.6	+0.5	+0.1	N.D.	-1.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14	+0.9	+0.4	-0.5	N.D.	-0.9
carbon source	Sucrose 20 mM (C)	-0.6	+0.2	+0.6	N.D.	+1.6
carbon source	D-Galactose 20 mM (C)	+0.4	-0.4	-0.2	N.D.	+2.1