Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS16215 and HMPREF1058_RS16210 are separated by 185 nucleotidesHMPREF1058_RS16210 and HMPREF1058_RS16205 are separated by 3 nucleotidesHMPREF1058_RS16205 and HMPREF1058_RS16200 are separated by 17 nucleotidesHMPREF1058_RS16200 and HMPREF1058_RS16195 are separated by 282 nucleotides HMPREF1058_RS16215: HMPREF1058_RS16215 - hypothetical protein, at 731,042 to 731,509 _RS16215 HMPREF1058_RS16210: HMPREF1058_RS16210 - hypothetical protein, at 731,695 to 732,264 _RS16210 HMPREF1058_RS16205: HMPREF1058_RS16205 - DUF3987 domain-containing protein, at 732,268 to 734,211 _RS16205 HMPREF1058_RS16200: HMPREF1058_RS16200 - DUF4248 domain-containing protein, at 734,229 to 734,453 _RS16200 HMPREF1058_RS16195: HMPREF1058_RS16195 - hypothetical protein, at 734,736 to 735,275 _RS16195
Group Condition HMPREF1058_RS16215 HMPREF1058_RS16210 HMPREF1058_RS16205 HMPREF1058_RS16200 HMPREF1058_RS16195
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -1.0 -3.0 -0.4 N.D. -3.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 -1.4 -2.2 -0.9 N.D. -2.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 -0.7 -2.4 -0.6 N.D. -3.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -1.2 -2.1 -0.6 N.D. -2.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -1.4 -2.6 -0.9 N.D. -1.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.8 -2.3 -0.5 N.D. -2.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 -0.9 -2.4 -0.9 N.D. -1.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -1.4 -1.1 -0.7 N.D. -2.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 -1.1 -1.8 -0.8 N.D. -1.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -1.2 -1.3 -0.5 N.D. -2.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 -1.6 -1.5 +0.0 N.D. -2.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 -1.2 -1.7 -0.7 N.D. -1.3
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1 -0.9 -2.9 +0.2 N.D. -1.2
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse4; day2 -2.1 -1.6 -0.2 N.D. -0.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6 -0.8 -1.3 -0.7 N.D. -1.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6 -1.1 -1.0 -0.7 N.D. -1.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 -0.8 -1.4 -0.7 N.D. -1.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day2 -1.3 -1.9 +0.2 N.D. -1.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9 -0.6 -1.0 -0.9 N.D. -1.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day7 -0.6 -1.7 -0.7 N.D. -0.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day5 -0.7 -1.3 -0.8 N.D. -1.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -1.0 -1.4 -0.4 N.D. -1.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day2 -1.1 -1.5 -0.1 N.D. -0.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4 -1.1 -0.9 -0.6 N.D. -1.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 -0.6 -1.0 -0.3 N.D. -1.6
carbon source Amylose from potato 5 mg/ml (C) -0.1 -3.0 -0.5 N.D. +0.3
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +1.8 +3.2 +0.9 N.D. -1.0
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +2.1 +2.8 +1.1 N.D. -0.4
carbon source Pectic galactan from potato 5mg/ml (C) +1.8 +3.2 +1.6 N.D. +0.8
carbon source Pectic galactan from potato 5mg/ml (C) +1.9 +3.7 +1.8 N.D. +1.9
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HMPREF1058_RS16215
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HMPREF1058_RS16210
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HMPREF1058_RS16200
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HMPREF1058_RS16195
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