Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS15755 and HMPREF1058_RS15750 are separated by 161 nucleotidesHMPREF1058_RS15750 and HMPREF1058_RS15745 are separated by 105 nucleotidesHMPREF1058_RS15745 and HMPREF1058_RS15740 are separated by 155 nucleotidesHMPREF1058_RS15740 and HMPREF1058_RS15735 are separated by 21 nucleotides HMPREF1058_RS15755: HMPREF1058_RS15755 - HlyD family efflux transporter periplasmic adaptor subunit, at 843,984 to 845,231 _RS15755 HMPREF1058_RS15750: HMPREF1058_RS15750 - glucosaminidase domain-containing protein, at 845,393 to 846,289 _RS15750 HMPREF1058_RS15745: HMPREF1058_RS15745 - hypothetical protein, at 846,395 to 847,036 _RS15745 HMPREF1058_RS15740: HMPREF1058_RS15740 - hypothetical protein, at 847,192 to 847,740 _RS15740 HMPREF1058_RS15735: HMPREF1058_RS15735 - hypothetical protein, at 847,762 to 848,124 _RS15735
Group Condition HMPREF1058_RS15755 HMPREF1058_RS15750 HMPREF1058_RS15745 HMPREF1058_RS15740 HMPREF1058_RS15735
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -3.1 -4.8 -0.9 -2.1 -1.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -3.4 -3.5 -0.5 -2.6 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -2.4 -2.8 -1.1 -3.3 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -1.8 -3.3 -0.8 -1.3 -1.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -1.7 -3.5 -1.0 -1.1 -1.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 -3.4 -3.4 -0.2 -1.5 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 -2.6 -2.5 -0.8 -2.5 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 -3.1 -2.9 +0.2 -1.0 -0.6
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 -3.0 -2.8 +0.3 -1.5 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6 -2.8 -2.7 +0.1 -1.2 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5 -2.7 -2.5 -0.0 -1.4 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 -1.9 -2.7 -0.3 -1.9 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 -2.3 -2.4 -0.3 -2.0 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 -2.0 -2.5 -0.4 -1.8 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 -0.6 -2.3 -0.8 -0.5 -2.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -0.8 -2.7 -0.8 -0.7 -1.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 -1.1 -1.4 -0.4 -3.0 -0.3
carbon source D-Mannose 20 mM (C) +0.8 +0.2 -0.1 -6.2 -0.9
carbon source Sucrose 20 mM (C) +0.3 -0.5 +0.3 -5.7 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6 -0.7 -2.2 -0.8 -0.9 -0.9
carbon source D-Galactose 20 mM (C) +0.8 -2.1 -0.2 -4.8 +0.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4 -2.1 -2.5 +0.1 -0.9 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -0.4 -2.0 -1.1 -1.3 -0.7
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 -2.8 -2.6 +0.3 -0.6 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -1.3 -1.9 +0.3 -2.0 -0.2
carbon source D-Galactose 20 mM (C) +1.0 -1.7 -0.5 -4.4 +0.8
carbon source D-Galactose 20 mM (C) +0.9 -1.7 -0.2 -4.1 +0.4
carbon source D-Galactose (C) +1.4 -1.4 -0.1 -2.6 +0.3
carbon source NAG 2.5 mg/ml (C) +0.3 +2.7 -0.0 +2.1 +0.9
carbon source NAG 2.5 mg/ml (C) +0.2 +2.9 +0.1 +2.1 +1.1
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HMPREF1058_RS15755
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HMPREF1058_RS15750
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HMPREF1058_RS15740
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HMPREF1058_RS15735
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