Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HMPREF1058_RS12985	HMPREF1058_RS12980	HMPREF1058_RS12975	HMPREF1058_RS12970	HMPREF1058_RS12965
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	+0.4	-0.9	-0.2	N.D.	-0.3
carbon source	(+)-Arabinogalactan 5 mg/ml (C)	-0.1	-1.6	+0.7	N.D.	+0.0
nitrogen source	L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	+0.3	-1.0	-0.4	N.D.	+0.2
carbon source	Rhamnogalacturonan from soy bean pectic fibre 5 mg/ml (C)	+0.3	-0.9	+0.4	N.D.	-0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6	-0.3	-1.0	+1.0	N.D.	-0.1
carbon source	D-Galacturonic Acid 20 mM (C)	-0.1	+0.8	-0.9	N.D.	+0.1
carbon source	(+)-Arabinogalactan; filtered 2.5 mg/ml (C)	+0.0	-1.1	+0.7	N.D.	+0.3
nitrogen source	Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	+0.3	-0.9	+0.5	N.D.	+0.7
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7	-0.3	-0.1	+1.2	N.D.	-0.1
carbon source	NAG (C)	+0.1	+1.2	-0.3	N.D.	+0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5	-0.2	+1.3	+0.0	N.D.	+0.2
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	-0.1	+1.1	-0.2	N.D.	+0.6
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse3; day1	-0.2	+1.3	+0.5	N.D.	-0.0
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6	-0.2	+1.4	+0.3	N.D.	+0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse8; day2	+0.2	+1.2	+0.1	N.D.	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4	-0.1	+1.3	+0.3	N.D.	+0.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1	+0.2	+1.2	+0.3	N.D.	+0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day1	-0.1	+1.4	+0.4	N.D.	+0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day3	+0.2	+1.4	+0.2	N.D.	+0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3	+0.2	+0.7	+0.8	N.D.	+0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5	-0.2	+1.4	+0.3	N.D.	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4	+0.0	+1.3	+0.3	N.D.	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day2	+0.2	+0.7	+0.9	N.D.	+0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6	-0.3	+1.5	+0.5	N.D.	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day2	+0.1	+1.1	+0.7	N.D.	+0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3	-0.1	+1.3	+0.8	N.D.	+0.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4	-0.1	+1.4	+0.9	N.D.	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3	+0.0	+1.5	+0.7	N.D.	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2	+0.2	+1.6	+0.7	N.D.	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse4; day2	+0.3	+1.8	+1.0	N.D.	+0.0