Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS12785 and HMPREF1058_RS12780 are separated by 213 nucleotidesHMPREF1058_RS12780 and HMPREF1058_RS12775 are separated by 5 nucleotidesHMPREF1058_RS12775 and HMPREF1058_RS12770 are separated by 106 nucleotidesHMPREF1058_RS12770 and HMPREF1058_RS12765 are separated by 7 nucleotides HMPREF1058_RS12785: HMPREF1058_RS12785 - long-chain fatty acid--CoA ligase, at 32,281 to 34,086 _RS12785 HMPREF1058_RS12780: HMPREF1058_RS12780 - M20 family metallo-hydrolase, at 34,300 to 35,364 _RS12780 HMPREF1058_RS12775: HMPREF1058_RS12775 - hypothetical protein, at 35,370 to 35,699 _RS12775 HMPREF1058_RS12770: HMPREF1058_RS12770 - polysaccharide biosynthesis protein, at 35,806 to 36,648 _RS12770 HMPREF1058_RS12765: HMPREF1058_RS12765 - NUDIX domain-containing protein, at 36,656 to 37,546 _RS12765
Group Condition HMPREF1058_RS12785 HMPREF1058_RS12780 HMPREF1058_RS12775 HMPREF1058_RS12770 HMPREF1058_RS12765
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -3.9 -6.2 -1.4 -0.2 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -3.0 -5.9 -0.6 +0.1 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day6 -2.6 -5.5 -0.9 -0.1 -0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 -2.6 -5.6 -0.8 -0.2 -0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 -2.2 -6.0 -0.6 -0.1 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -2.3 -5.9 -0.6 -0.1 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -2.4 -5.8 -0.5 -0.0 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day5 -2.2 -5.7 -0.7 -0.1 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -3.0 -4.5 -1.2 -0.0 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -2.9 -5.3 -0.6 +0.0 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6 -2.1 -6.0 -0.5 -0.1 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -2.2 -4.7 -1.5 -0.3 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day7 -2.0 -5.7 -0.8 -0.1 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6 -2.2 -5.6 -0.4 -0.0 -0.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day5 -1.9 -6.1 -0.2 +0.0 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 -2.0 -5.7 -0.4 -0.1 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 -2.2 -5.3 -0.4 -0.1 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -1.2 -5.9 -0.8 -0.4 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 -2.1 -4.3 -1.4 -0.1 -0.1
carbon source Arabinan from sugar beet 5mg/ml (C) -0.5 -6.8 -0.4 -0.4 +0.1
carbon source Beta-Lactose 20 mM (C) -0.7 -7.4 -0.0 +0.1 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 -1.4 -5.5 -0.8 -0.4 +0.2
carbon source beta-Cyclodextrin 5 mg/ml (C) -1.1 -6.6 +0.3 -0.1 -0.2
carbon source D-Xylose 20 mM (C) -0.6 -7.2 +0.1 +0.0 +0.0
carbon source Beta-Lactose 20 mM (C) -0.6 -7.6 +0.3 +0.1 +0.2
carbon source Mannan from Saccharomyces cerevisiae 5 mg/ml (C) -1.1 -6.6 +0.5 -0.1 -0.1
carbon source D-Glucose 20 mM (C) +0.0 -7.5 +0.4 -0.1 -0.0
carbon source D-Maltose 20 mM (C) -0.1 -7.4 +0.5 +0.1 -0.0
carbon source Sucrose 20 mM (C) +0.9 -6.1 -1.7 +0.1 +0.1
carbon source D-Fructose 20 mM (C) +0.3 -7.3 +0.4 -0.0 +0.0
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HMPREF1058_RS12785
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HMPREF1058_RS12780
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HMPREF1058_RS12770
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HMPREF1058_RS12765
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