Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 297 experiments or choose conditions or try the comparative fitness browser

500 ntHMPREF1058_RS12765 and HMPREF1058_RS12760 overlap by 50 nucleotidesHMPREF1058_RS12760 and HMPREF1058_RS12755 are separated by 138 nucleotidesHMPREF1058_RS12755 and HMPREF1058_RS12750 are separated by 77 nucleotidesHMPREF1058_RS12750 and HMPREF1058_RS12745 are separated by 1201 nucleotides HMPREF1058_RS12765: HMPREF1058_RS12765 - NUDIX domain-containing protein, at 36,656 to 37,546 _RS12765 HMPREF1058_RS12760: HMPREF1058_RS12760 - hypothetical protein, at 37,497 to 38,153 _RS12760 HMPREF1058_RS12755: HMPREF1058_RS12755 - hypothetical protein, at 38,292 to 41,141 _RS12755 HMPREF1058_RS12750: HMPREF1058_RS12750 - helix-turn-helix transcriptional regulator, at 41,219 to 41,707 _RS12750 HMPREF1058_RS12745: HMPREF1058_RS12745 - 3-deoxy-D-manno-octulosonic acid transferase, at 42,909 to 44,129 _RS12745
Group Condition HMPREF1058_RS12765 HMPREF1058_RS12760 HMPREF1058_RS12755 HMPREF1058_RS12750 HMPREF1058_RS12745
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -0.3 -0.2 +0.1 -1.6 N.D.
carbon source (+)-Arabinogalactan 5 mg/ml (C) -0.2 -0.4 -0.0 -1.4 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.3 -0.1 +0.1 -1.6 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -0.4 -0.1 +0.1 -1.5 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.1 -0.2 +0.1 -1.7 N.D.
carbon source D-Glucose 5 mg/ml (C) -0.3 -0.2 -0.2 -1.2 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -0.1 -0.1 -0.0 -1.6 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6 -0.3 -0.1 +0.1 -1.5 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 -0.5 -0.1 -0.2 -0.9 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1 -0.0 -0.6 +0.1 -1.1 N.D.
carbon source Galactose 1-phosphate dipotassium salt (C) -0.4 -0.3 -0.2 -0.8 N.D.
carbon source D-Glucose 5 mg/ml (C) -0.3 -0.2 -0.3 -0.8 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -0.2 -0.0 +0.1 -1.5 N.D.
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.2 -0.2 -0.4 -0.8 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.1 -0.0 +0.1 -1.4 N.D.
carbon source (+)-Arabinogalactan; filtered 2.5 mg/ml (C) -0.4 -0.1 -0.4 -0.7 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9 -0.3 -0.0 -0.0 -1.0 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 -0.1 +0.1 +0.0 -1.4 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -0.2 -0.0 +0.0 -1.2 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 -0.0 -0.0 +0.0 -1.4 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 -0.0 -0.2 -0.0 -1.1 N.D.
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.1 -0.1 -0.3 -0.8 N.D.
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) -0.3 -0.2 -0.2 -0.5 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day5 -0.2 +0.0 +0.0 -1.2 N.D.
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 -0.3 +0.1 +0.0 -1.1 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 -0.0 -0.1 +0.1 -1.2 N.D.
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day6 -0.2 +0.1 -0.0 -1.0 N.D.
carbon source Polygalacturonic 5 mg/ml (C) -0.3 +0.1 -0.1 -0.7 N.D.
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 +0.1 +0.0 +0.1 -1.2 N.D.
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day7 -0.0 +0.3 +0.2 -0.9 N.D.
remove
HMPREF1058_RS12765
plot		 remove
HMPREF1058_RS12760
plot		 remove
HMPREF1058_RS12755		 remove
HMPREF1058_RS12750
plot		 remove
HMPREF1058_RS12745
plot