Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS12180 and HMPREF1058_RS12175 overlap by 40 nucleotidesHMPREF1058_RS12175 and HMPREF1058_RS12170 are separated by 213 nucleotidesHMPREF1058_RS12170 and HMPREF1058_RS12165 are separated by 20 nucleotidesHMPREF1058_RS12165 and HMPREF1058_RS12160 overlap by 4 nucleotides HMPREF1058_RS12180: HMPREF1058_RS12180 - hypothetical protein, at 183,739 to 184,158 _RS12180 HMPREF1058_RS12175: HMPREF1058_RS12175 - MFS transporter AraJ, at 184,119 to 185,279 _RS12175 HMPREF1058_RS12170: HMPREF1058_RS12170 - hypothetical protein, at 185,493 to 185,741 _RS12170 HMPREF1058_RS12165: HMPREF1058_RS12165 - radical SAM protein, at 185,762 to 186,832 _RS12165 HMPREF1058_RS12160: HMPREF1058_RS12160 - hypothetical protein, at 186,829 to 187,785 _RS12160
Group Condition HMPREF1058_RS12180 HMPREF1058_RS12175 HMPREF1058_RS12170 HMPREF1058_RS12165 HMPREF1058_RS12160
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -0.5 -0.7 +0.2 -0.6 +0.0
carbon source D-Galactose (C) -0.0 +0.0 -1.5 +0.1 -0.1
carbon source Galactose 1-phosphate dipotassium salt (C) +0.2 -0.2 -0.9 -0.3 -0.3
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.2 +0.2 -1.7 +0.0 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.5 -0.8 +0.4 -0.6 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -0.7 -0.7 +0.5 -0.4 +0.1
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) -0.2 +0.4 -1.2 +0.0 -0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day1 -0.6 +0.3 -0.3 +0.2 -0.6
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 +0.2 +0.8 -1.7 +0.1 -0.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day2 -0.0 +0.8 -1.2 -0.0 -0.4
carbon source Sucrose 20 mM (C) +0.3 -0.0 -1.3 +0.1 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -0.6 -0.9 +0.9 -0.4 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1 +0.2 +0.4 -1.1 +0.2 -0.3
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse3; day1 -0.1 +0.6 -0.8 +0.2 -0.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 +0.1 +0.9 -1.1 +0.1 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day1 +0.5 +0.2 -0.7 -0.0 -0.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 +0.1 +0.9 -0.9 +0.1 -0.6
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 +0.4 +1.0 -1.1 +0.0 -0.6
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day2 +0.2 +0.8 -0.6 +0.1 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day2 +0.0 +0.8 -0.9 +0.0 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 -0.2 -0.7 +1.2 -0.3 -0.2
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 +0.2 +1.0 -1.2 +0.2 -0.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day1 +0.4 +0.5 -0.5 -0.2 -0.3
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 -0.1 +0.7 -1.4 +0.9 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3 +0.3 +0.9 -0.7 +0.0 -0.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse4; day2 +0.2 +1.0 -0.1 +0.2 -0.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 +0.6 +0.9 -0.3 +0.3 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +0.4 +0.9 -0.0 +0.2 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -0.1 +0.2 +1.2 +0.5 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 +0.1 +0.4 +1.5 +0.5 -0.2
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HMPREF1058_RS12180
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