Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HMPREF1058_RS12060	HMPREF1058_RS12055	HMPREF1058_RS12050	HMPREF1058_RS0119610	HMPREF1058_RS12045
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1	-0.1	-0.1	-0.4	-0.1	-0.3
carbon source	Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C)	-0.1	-0.3	-0.2	-0.0	-0.3
carbon source	Galactose 1-phosphate dipotassium salt (C)	+0.1	+0.2	-0.6	-0.0	-0.4
nitrogen source	Ammonium chloride (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen	-0.1	-0.2	+0.2	-0.1	-0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6	-0.3	+0.0	+0.2	-0.1	-0.3
carbon source	D-Galactose (C)	+0.0	+0.2	-0.3	+0.1	-0.3
nitrogen source	L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	+0.1	+0.2	-0.5	+0.0	-0.1
carbon source	D-Glucosamine Hydrochloride 2.5 mg/ml (C)	+0.0	-0.3	+0.4	-0.0	-0.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day2	-0.3	+0.1	+0.2	-0.1	-0.1
carbon source	(+)-Arabinogalactan 5 mg/ml (C)	+0.1	+0.3	-0.1	+0.1	-0.3
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	-0.1	-0.1	+0.4	+0.2	-0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3	+0.1	+0.2	+0.3	-0.1	-0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6	-0.2	-0.1	+0.5	-0.1	+0.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6	-0.2	+0.3	+0.4	-0.0	-0.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day6	-0.0	-0.1	+0.5	+0.1	-0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6	-0.1	-0.1	+0.6	-0.1	-0.0
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5	-0.2	-0.1	+0.6	+0.0	+0.0
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day5	-0.1	-0.1	+0.5	-0.1	+0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7	-0.2	-0.1	+0.4	-0.0	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9	-0.3	+0.0	+0.5	-0.1	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1	+0.1	+0.3	+0.1	+0.2	-0.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day1	-0.1	+0.1	+0.3	+0.1	+0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6	-0.1	+0.4	+0.3	+0.1	+0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4	-0.0	+0.4	+0.3	+0.1	-0.0
carbon source	D-Glucose (C)	+0.1	+0.1	+0.2	-0.1	+0.5
carbon source	Dextran 5 mg/ml (C)	-0.2	-0.0	+0.2	+0.3	+0.5
nitrogen source	L-Asparagine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen	+0.3	-0.0	+0.6	+0.1	-0.1
carbon source	D-Maltose 20 mM (C)	+0.1	+0.0	+0.4	+0.1	+0.3
nitrogen source	Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	-0.0	-0.1	+0.6	+0.3	+0.2
carbon source	Dextran 5 mg/ml (C)	+0.1	+0.3	+0.2	+0.4	+0.3