Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS11600 and HMPREF1058_RS11595 are separated by 10 nucleotidesHMPREF1058_RS11595 and HMPREF1058_RS11590 are separated by 557 nucleotidesHMPREF1058_RS11590 and HMPREF1058_RS11585 are separated by 83 nucleotidesHMPREF1058_RS11585 and HMPREF1058_RS11580 are separated by 44 nucleotides HMPREF1058_RS11600: HMPREF1058_RS11600 - metallophosphoesterase, at 337,966 to 338,937 _RS11600 HMPREF1058_RS11595: HMPREF1058_RS11595 - TonB-dependent receptor, at 338,948 to 341,716 _RS11595 HMPREF1058_RS11590: HMPREF1058_RS11590 - hypothetical protein, at 342,274 to 342,753 _RS11590 HMPREF1058_RS11585: HMPREF1058_RS11585 - hypothetical protein, at 342,837 to 345,860 _RS11585 HMPREF1058_RS11580: HMPREF1058_RS11580 - helix-turn-helix transcriptional regulator, at 345,905 to 346,399 _RS11580
Group Condition HMPREF1058_RS11600 HMPREF1058_RS11595 HMPREF1058_RS11590 HMPREF1058_RS11585 HMPREF1058_RS11580
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 +0.0 +0.3 -0.0 +0.3 -2.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 +0.2 +0.3 -0.4 +0.1 -1.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.2 +0.2 -0.1 +0.0 -1.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 +0.1 -0.3 -0.3 +0.5 -1.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 +0.3 +0.3 -0.6 +0.2 -1.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3 +0.3 +0.3 -0.2 +0.1 -1.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day6 +0.0 -0.2 -0.1 +0.8 -1.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 +0.2 +0.0 -0.4 +0.7 -1.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 +0.6 +0.3 -0.5 +0.2 -1.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 +0.2 +0.4 +0.2 +0.2 -1.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 +0.1 -0.2 +0.1 +0.8 -1.7
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -0.2 +0.6 +0.5 +0.2 -1.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 +0.4 +0.4 +0.2 +0.0 -1.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day3 +0.4 +0.3 -0.1 +0.2 -1.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6 +0.3 +0.2 +0.1 +0.6 -1.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 +0.2 +0.1 +0.2 +0.5 -1.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 +0.4 +0.4 +0.2 +0.1 -1.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 +0.2 -0.1 -0.2 +0.9 -1.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day7 +0.1 +0.2 +0.0 +0.8 -1.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day5 +0.2 +0.1 +0.3 +0.6 -1.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 +0.4 +0.2 +0.2 +0.5 -1.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 +0.3 +0.3 +0.4 +0.6 -1.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 +0.2 +0.4 +0.6 +0.6 -1.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 +0.3 +0.3 +0.5 +0.7 -1.8
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse4; day2 +0.9 +0.4 +0.1 +0.1 -1.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 +0.4 +0.4 +0.4 +0.6 -1.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 +0.3 +0.4 +0.3 +0.7 -1.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9 +0.2 +0.4 +0.3 +0.7 -1.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 +0.6 +0.6 +0.4 +0.5 -1.7
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 +0.4 +0.5 -0.5 +0.8 -0.6
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HMPREF1058_RS11600
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HMPREF1058_RS11580
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