Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HMPREF1058_RS10740	HMPREF1058_RS10735	HMPREF1058_RS10730	HMPREF1058_RS10725	HMPREF1058_RS10720
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14	-0.0	-0.4	+0.0	-2.0	-4.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	-0.0	-0.3	+0.0	-2.2	-4.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9	+0.0	-0.4	+0.0	-2.3	-4.0
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day5	-0.0	-0.2	+0.1	-1.5	-4.1
carbon source	Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)	-0.1	-0.1	+0.1	-0.1	-5.4
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day4	-0.1	-0.2	+0.1	-1.2	-4.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day4	-0.0	-0.1	+0.1	-1.1	-4.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day4	-0.1	-0.1	+0.1	-1.3	-4.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day5	+0.1	-0.2	+0.1	-1.3	-4.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day6	-0.1	-0.2	+0.1	-1.6	-3.7
carbon source	Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)	-0.1	-0.0	+0.1	-0.4	-4.9
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day6	-0.1	-0.3	+0.1	-1.7	-3.3
carbon source	polygalacturonic (ultrapure); filtered 2.5 mg/ml (C)	-0.2	-0.1	+0.1	-0.5	-4.6
carbon source	polygalacturonic; autoclaved 2.5 mg/ml (C)	-0.1	-0.2	+0.0	-0.4	-4.5
carbon source	beta-Cyclodextrin 2.5 mg/ml (C)	-0.1	-0.1	+0.1	-0.5	-4.5
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7	-0.1	-0.4	-0.0	-2.5	-2.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day5	-0.0	-0.2	+0.1	-1.4	-3.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day3	-0.1	-0.1	+0.1	-0.8	-4.0
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8	-0.0	+0.2	+0.2	-1.5	-3.9
carbon source	Red Arabinan from sugar-beet; filtered 5 mg/ml (C)	+0.0	+0.1	+0.1	-0.4	-4.7
carbon source	D-Glucose 5 mg/ml (C)	-0.1	-0.0	+0.1	-0.2	-4.7
carbon source	beta-Cyclodextrin 2.5 mg/ml (C)	+0.0	-0.1	+0.0	-0.6	-4.3
carbon source	D-Glucose 5 mg/ml (C)	-0.0	-0.1	+0.2	-0.4	-4.6
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day5	-0.1	-0.2	+0.1	-1.2	-3.5
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7	-0.0	+0.2	+0.2	-1.3	-4.0
carbon source	(+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)	-0.3	+0.1	+0.1	-0.6	-4.2
carbon source	Pectin from apple; autoclaved 2.5 mg/ml (C)	+0.1	-0.1	+0.1	-0.5	-4.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7	+0.1	+0.1	+0.2	-0.9	-4.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day6	+0.1	-0.2	+0.1	-1.5	-3.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6	+0.1	+0.1	+0.2	-0.6	-4.3