Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS10155 and HMPREF1058_RS10145 are separated by 367 nucleotidesHMPREF1058_RS10145 and HMPREF1058_RS10140 are separated by 119 nucleotidesHMPREF1058_RS10140 and HMPREF1058_RS10135 overlap by 11 nucleotidesHMPREF1058_RS10135 and HMPREF1058_RS10130 are separated by 2 nucleotides HMPREF1058_RS10155: HMPREF1058_RS10155 - hypothetical protein, at 714,675 to 715,103 _RS10155 HMPREF1058_RS10145: HMPREF1058_RS10145 - hypothetical protein, at 715,471 to 716,052 _RS10145 HMPREF1058_RS10140: HMPREF1058_RS10140 - hypothetical protein, at 716,172 to 716,624 _RS10140 HMPREF1058_RS10135: HMPREF1058_RS10135 - hypothetical protein, at 716,614 to 716,979 _RS10135 HMPREF1058_RS10130: HMPREF1058_RS10130 - MBL fold metallo-hydrolase, at 716,982 to 717,716 _RS10130
Group Condition HMPREF1058_RS10155 HMPREF1058_RS10145 HMPREF1058_RS10140 HMPREF1058_RS10135 HMPREF1058_RS10130
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day1 +1.0 +0.2 -1.1 +0.3 -1.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 +0.6 -0.7 +0.1 +0.3 -1.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 +0.3 +0.5 -0.3 +0.3 -1.4
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) -0.4 -1.5 +0.5 +0.9 -0.0
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -1.2 +0.6 +0.1 +0.8 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.6 -0.1 -0.3 +0.7 -1.1
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.2 +1.2 +0.5 -0.5 -1.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day2 +0.9 +0.5 -1.0 +0.1 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6 +0.4 +0.6 -0.4 +0.7 -1.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5 +0.6 +0.3 -0.1 +0.8 -1.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4 +0.3 +0.4 -0.3 +1.0 -0.8
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 +0.8 +0.5 -0.1 +1.0 -1.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day3 +0.3 +0.9 +0.4 +0.3 -0.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4 +0.8 +0.7 +0.1 +0.7 -1.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 +0.6 +0.8 -0.1 +0.5 -0.8
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 +0.7 +0.6 -0.4 +1.3 -1.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 +0.7 +0.7 +0.1 +1.0 -1.3
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 +0.2 -0.3 +0.2 +1.6 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +0.8 +0.2 -0.3 +1.1 -0.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -0.2 -0.3 +0.4 +1.9 -0.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 +0.7 +0.7 +0.3 +0.8 -1.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3 +0.8 +0.7 -0.0 +0.9 -0.9
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse4; day2 +0.5 +1.2 -0.1 +0.8 -1.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day1 +0.7 +1.3 -0.2 +0.3 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 +0.5 +0.1 +0.9 +1.1 -1.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 +0.4 +0.1 +1.0 +1.0 -0.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 +0.2 +1.9 +0.6 +0.4 -1.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 +1.4 +1.2 +0.4 +0.5 -1.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 +0.6 +1.3 +0.5 +1.0 -1.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day2 +0.8 +0.6 +0.5 +1.0 -0.5
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