Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Phocaeicola vulgatus CL09T03C04
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 297 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
HMPREF1058_RS10145 and HMPREF1058_RS10140 are separated by 119 nucleotides
HMPREF1058_RS10140 and HMPREF1058_RS10135 overlap by 11 nucleotides
HMPREF1058_RS10135 and HMPREF1058_RS10130 are separated by 2 nucleotides
HMPREF1058_RS10130 and HMPREF1058_RS0119665 overlap by 1 nucleotides
HMPREF1058_RS10145: HMPREF1058_RS10145 - hypothetical protein, at 715,471 to 716,052
_RS10145
HMPREF1058_RS10140: HMPREF1058_RS10140 - hypothetical protein, at 716,172 to 716,624
_RS10140
HMPREF1058_RS10135: HMPREF1058_RS10135 - hypothetical protein, at 716,614 to 716,979
_RS10135
HMPREF1058_RS10130: HMPREF1058_RS10130 - MBL fold metallo-hydrolase, at 716,982 to 717,716
_RS10130
HMPREF1058_RS0119665: HMPREF1058_RS0119665 - recombinase RecT, at 717,716 to 718,705
_RS0119665
Group
Condition
HMPREF1058
_RS10145
HMPREF1058
_RS10140
HMPREF1058
_RS10135
HMPREF1058
_RS10130
HMPREF1058
_RS0119665
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14
-0.7
+0.1
+0.3
-1.3
-1.2
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day1
+0.2
-1.1
+0.3
-1.9
+0.6
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9
+0.1
+0.1
+0.3
-1.0
-1.3
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9
+0.2
-0.1
+0.3
-1.1
-1.0
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5
+0.5
-0.3
+0.3
-1.4
-0.5
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7
+0.2
+0.2
+0.6
-0.8
-0.9
carbon source
(+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)
-1.5
+0.5
+0.9
-0.0
-0.5
carbon source
Pectin from citrus peel (C)
-0.6
-0.4
+0.4
-0.7
+0.6
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day2
+0.5
-1.0
+0.1
-0.6
+0.4
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6
+0.6
-0.4
+0.7
-1.1
+0.0
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4
+0.7
+0.1
+0.7
-1.2
-0.1
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6
+0.7
+0.3
+0.8
-1.1
-0.3
carbon source
Pectin from apple; autoclaved 2.5 mg/ml (C)
-0.8
+0.4
+0.9
-0.4
+0.3
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day3
+0.9
+0.4
+0.3
-0.8
-0.2
mouse
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5
+0.7
+0.1
+1.0
-1.3
+0.2
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4
+0.4
-0.3
+1.0
-0.8
+0.4
mouse
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4
+0.5
-0.1
+1.0
-1.1
+0.5
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7
+0.1
+0.9
+1.1
-1.0
-0.2
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+1.2
+0.5
-0.5
-1.1
+0.8
mouse
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3
+0.7
-0.0
+0.9
-0.9
+0.3
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6
+0.1
+1.0
+1.0
-0.9
-0.3
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4
+1.2
+0.4
+0.5
-1.2
+0.1
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2
+0.2
-0.3
+1.1
-0.5
+0.6
mouse
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6
+0.6
-0.4
+1.3
-1.1
+0.8
mouse
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7
-0.3
+0.2
+1.6
-0.4
+0.4
mouse
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse4; day2
+1.2
-0.1
+0.8
-1.0
+0.8
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5
+1.3
+0.5
+1.0
-1.0
+0.1
mouse
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8
-0.3
+0.4
+1.9
-0.4
+0.4
mouse
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day2
+0.6
+0.5
+1.0
-0.5
+0.4
mouse
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2
+1.9
+0.6
+0.4
-1.1
+0.2
remove
HMPREF1058_RS10145
plot
remove
HMPREF1058_RS10140
plot
remove
HMPREF1058_RS10135
remove
HMPREF1058_RS10130
plot
remove
HMPREF1058_RS0119665
plot