Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HMPREF1058_RS09885	HMPREF1058_RS0119685	HMPREF1058_RS09880	HMPREF1058_RS09875	HMPREF1058_RS09870
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day1	-0.2	-4.4	-0.7	N.D.	-0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2	-0.1	-4.3	+0.2	N.D.	+0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9	-0.1	-2.5	-1.3	N.D.	-0.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6	-0.5	-2.4	-0.8	N.D.	-0.2
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6	-0.4	-2.6	-0.5	N.D.	-0.1
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1	-0.3	-2.3	-1.2	N.D.	+0.4
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7	+0.0	-1.6	-0.5	N.D.	-0.7
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3	-0.1	-1.2	-1.1	N.D.	-0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4	-0.3	-1.6	-0.7	N.D.	-0.0
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	-0.3	+0.3	-2.3	N.D.	-0.3
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8	-0.0	-1.0	-0.7	N.D.	-0.7
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6	-0.1	-1.9	-0.2	N.D.	-0.2
carbon source	D-Galactose 20 mM (C)	-0.3	-1.7	+0.3	N.D.	-0.7
nitrogen source	L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	-0.5	-1.3	-0.3	N.D.	-0.3
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5	-0.2	-1.1	-0.6	N.D.	-0.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7	-0.1	-2.2	-0.0	N.D.	+0.0
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1	+0.0	-0.7	-1.9	N.D.	+0.4
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3	+0.2	-1.1	-1.0	N.D.	-0.0
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen	-0.1	-2.0	+0.3	N.D.	-0.1
mouse	diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day1	+0.3	-1.7	-0.4	N.D.	+0.2
carbon source	(+)-Arabinogalactan 5 mg/ml (C)	+0.5	-0.2	-1.8	N.D.	+0.2
mouse	diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4	+0.5	-1.2	+0.4	N.D.	+0.4
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen	-0.1	-1.0	+1.5	N.D.	-0.2
carbon source	Galactose 1-phosphate dipotassium salt (C)	-0.3	+1.9	-0.7	N.D.	-0.5
carbon source	(+)-Arabinogalactan; autoclaved 2.5 mg/ml (C)	+0.2	-0.9	+1.4	N.D.	-0.2
carbon source	D-Galacturonic Acid 20 mM (C)	+0.3	+1.4	-0.6	N.D.	-0.2
nitrogen source	Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	-0.9	+0.6	+1.2	N.D.	+0.6
carbon source	Sucrose 20 mM (C)	+0.3	+0.7	+1.0	N.D.	-0.3
carbon source	D-Galactose (C)	-0.0	+1.6	+1.0	N.D.	-0.3
carbon source	Galactose 1-phosphate dipotassium salt (C)	-0.0	+2.5	+0.6	N.D.	-0.3