Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS09750 and HMPREF1058_RS09745 overlap by 8 nucleotidesHMPREF1058_RS09745 and HMPREF1058_RS09740 are separated by 12 nucleotidesHMPREF1058_RS09740 and HMPREF1058_RS09735 overlap by 28 nucleotidesHMPREF1058_RS09735 and HMPREF1058_RS09730 are separated by 13 nucleotides HMPREF1058_RS09750: HMPREF1058_RS09750 - glycosyltransferase, at 804,561 to 805,307 _RS09750 HMPREF1058_RS09745: HMPREF1058_RS09745 - glycosyltransferase, at 805,300 to 806,562 _RS09745 HMPREF1058_RS09740: HMPREF1058_RS09740 - glycosyltransferase family 4 protein, at 806,575 to 807,690 _RS09740 HMPREF1058_RS09735: HMPREF1058_RS09735 - hypothetical protein, at 807,663 to 808,679 _RS09735 HMPREF1058_RS09730: HMPREF1058_RS09730 - LicD family protein, at 808,693 to 809,490 _RS09730
Group Condition HMPREF1058_RS09750 HMPREF1058_RS09745 HMPREF1058_RS09740 HMPREF1058_RS09735 HMPREF1058_RS09730
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -4.5 -5.9 -0.4 -4.3 -4.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -3.9 -5.5 -0.9 -5.0 -3.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 -4.0 -5.5 -0.7 -4.8 -2.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 -3.7 -5.3 -1.0 -4.5 -2.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6 -3.6 -5.2 -1.0 -4.4 -2.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 -3.8 -5.3 -0.8 -4.0 -2.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -4.8 -5.9 -0.0 -3.0 -3.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5 -3.8 -5.3 -0.9 -3.9 -2.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 -3.7 -5.2 -1.0 -4.1 -2.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -5.3 -5.7 +0.0 -2.7 -2.7
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4 -4.0 -5.4 -0.8 -3.1 -2.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4 -3.8 -5.0 -0.9 -3.1 -2.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 -3.7 -5.2 -1.0 -2.5 -2.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -3.5 -5.0 -0.8 -3.4 -2.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 -3.5 -5.0 -0.8 -3.1 -2.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -5.4 -4.8 +0.2 -2.3 -2.3
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day3 -3.7 -5.2 -0.8 -2.8 -2.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day3 -4.0 -5.0 -0.6 -2.5 -2.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6 -5.5 -4.5 +0.1 -1.9 -2.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day3 -4.1 -4.3 -0.7 -2.4 -1.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 -3.3 -4.7 -0.5 -2.8 -1.9
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -3.5 -4.4 -0.6 -2.9 -1.7
carbon source D-Maltose 20 mM (C) -4.3 -3.0 +0.3 -2.8 -2.4
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day2 -3.4 -4.5 -0.6 -2.1 -1.4
carbon source D-Glucose 5 mg/ml (C) -3.0 -3.8 +0.5 -3.0 -2.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 -4.1 -4.3 +0.3 -1.6 -1.8
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 -4.2 -4.6 +0.3 -1.4 -1.5
carbon source D-Galactose 20 mM (C) -3.0 -2.1 +1.0 -3.2 -2.9
carbon source Galactose 1-phosphate dipotassium salt (C) +1.8 +3.1 +2.0 +4.3 +4.1
carbon source Galactose 1-phosphate dipotassium salt (C) +2.1 +3.3 +2.3 +4.5 +3.9
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HMPREF1058_RS09750
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HMPREF1058_RS09745
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HMPREF1058_RS09735
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HMPREF1058_RS09730
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