Fitness for 5 genes in Phocaeicola vulgatus CL09T03C04

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500 ntHMPREF1058_RS0119720 and HMPREF1058_RS08820 are separated by 109 nucleotidesHMPREF1058_RS08820 and HMPREF1058_RS08815 are separated by 830 nucleotidesHMPREF1058_RS08815 and HMPREF1058_RS08810 are separated by 26 nucleotidesHMPREF1058_RS08810 and HMPREF1058_RS08805 are separated by 201 nucleotides HMPREF1058_RS0119720: HMPREF1058_RS0119720 - hypothetical protein, at 1,020,639 to 1,020,869 _RS0119720 HMPREF1058_RS08820: HMPREF1058_RS08820 - glycoside hydrolase, at 1,020,979 to 1,022,493 _RS08820 HMPREF1058_RS08815: HMPREF1058_RS08815 - TonB-dependent receptor, at 1,023,324 to 1,026,353 _RS08815 HMPREF1058_RS08810: HMPREF1058_RS08810 - RagB/SusD family nutrient uptake outer membrane protein, at 1,026,380 to 1,028,146 _RS08810 HMPREF1058_RS08805: HMPREF1058_RS08805 - aryl-sulfate sulfotransferase, at 1,028,348 to 1,030,147 _RS08805
Group Condition HMPREF1058_RS0119720 HMPREF1058_RS08820 HMPREF1058_RS08815 HMPREF1058_RS08810 HMPREF1058_RS08805
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 -2.1 -0.5 -0.2 -0.4 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 -2.4 -0.0 -0.1 -0.5 -0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 -1.7 -0.2 -0.2 -0.6 -0.3
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 -1.6 -0.6 -0.3 -0.3 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1 -1.5 -0.1 -0.5 -0.7 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 -2.4 +0.1 -0.1 -0.3 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4 -1.5 -0.2 -0.3 -0.5 -0.2
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 -3.0 +0.0 +0.0 -0.0 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -1.7 -0.3 -0.2 -0.3 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 -1.6 -0.2 -0.3 -0.3 -0.3
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 -1.2 -0.6 -0.3 -0.4 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 -2.1 -0.3 -0.1 -0.2 +0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day7 -2.3 +0.0 -0.0 -0.1 -0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 -1.0 +0.4 -0.3 -0.7 -1.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day2 -1.5 -0.4 -0.2 -0.3 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day6 -2.3 +0.2 -0.1 -0.2 -0.0
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -1.3 -0.4 -0.2 -0.2 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 -1.8 -0.5 -0.0 -0.2 +0.2
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -1.4 -0.0 -0.2 -0.4 -0.4
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 -1.4 -0.3 -0.2 -0.3 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9 -2.0 +0.1 -0.2 -0.0 -0.1
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3 -1.5 -0.2 -0.1 -0.5 +0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -1.5 +0.3 -0.2 -0.3 -0.5
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -1.0 +0.2 -0.3 -0.6 -0.6
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -1.0 +0.1 -0.3 -0.4 -0.5
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day7 -2.3 +0.2 -0.1 +0.1 -0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day5 -1.7 +0.3 -0.2 -0.3 +0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 -2.4 +0.7 -0.2 -0.0 +0.1
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 -1.7 +0.4 -0.2 +0.0 +0.0
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 -1.5 +0.5 -0.2 +0.1 -0.1
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HMPREF1058_RS0119720
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HMPREF1058_RS08805
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